| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5926359 = | 50 (0.920) | 4 (0.080) | 4/244 | NT | 8.4% | coding (1536/1623 nt) | PP_5195 | iron ABC transporter permease |
| ? | NC_002947 | 5926390 = | 40 (0.790) | coding (1505/1623 nt) | PP_5195 | iron ABC transporter permease | |||||
GCCGGGGGCGCTTGGCGCCGCGCTGCTGGTGTTCGTCGATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5926509‑5926359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcgctgGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACCTTGA > NC_002947/5926390‑5926534 GCCGGGGGCGCTTGGCGCCGCGCTGCTGGTGTTCGTCGATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGC < 1:229092/149‑1GCCGGGGGCGCTTGGCGCCGCGCTGCTGGTGTTCGTCGATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGC > 6:115938/1‑149 CCGCGCTGCTGGTGTTCGTCGATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGCT > 3:172675/1‑133 CCGCGCTGCTGGTGTTCGTCGATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGCT < 4:172675/133‑1 ATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCG > 6:259711/1‑110 ATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCG < 5:259711/110‑1 TCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCC > 8:27379/1‑148 CAGCGAGGGCGAGTGGGCGCGCGCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAA < 3:109647/107‑1 CAGCGAGGGCGAGTGGGCGCGCGCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAA > 4:109647/1‑107 GCGAGGGCGAGTGGGCACGCGCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGG > 4:237315/1‑148 caCGCGCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGA < 3:237315/147‑1 GCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACAC < 7:27379/149‑1 CCTGGCTGGTCATCTCGAACACCCGCTCGGCGAGGGTATCCCAGCCGATCGGCCGCATCAGCAACGTGGCTGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGGCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACC < 4:215449/149‑1 CCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACC > 2:75747/1‑149 CCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACC > 4:35283/1‑149 GCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACCTTGA < 3:164234/149‑1 GCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACCTT < 5:124051/147‑1 CTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCAGCAGCAGCGGCAGCTACACCTTGA > 8:288856/1‑148 GCCGGGGGCGCTTGGCGCCGCGCTGCTGGTGTTCGTCGATGTGCTTAAGGAAATGCCCGCCACGTTGCTGATGCGGCCGTTCGGCTGGGATACCCTCGCCGTGCGGGTGTTCGAGATGACCAGCGAGGGCGAGTGGGCGCGCGCCTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5926509‑5926359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcgctgGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGCATTTCCTTAAGCACATCGACGAACACCAGCAGCGCGGCGCCAAGCGCCCCCGGCACCAGCAGCGGCAGATACACCTTGA > NC_002947/5926390‑5926534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |