| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6077821 = | 42 (0.780) | 5 (0.110) | 5/212 | NT | 14.2% | intergenic (‑123/+115) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| ? | NC_002947 | 6077921 = | 26 (0.590) | intergenic (‑223/+15) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter | |||||
GCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6077991‑6077821‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagccgcgaagaggccagTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAG > NC_002947/6077921‑6078068 GCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACG < 4:239196/149‑1 CTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGC < 5:193270/149‑1 GCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCGCCTTCAGGTTTCGGGGTGCGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAG > 1:288258/1‑149 GCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCCCGCCTAAAGG‑GTAGGGGTCGGGCGTGAGGCCTGTGGAAA‑CCCCCGGTAGGAACCGCTTTAGa > 1:296520/1‑148 TAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAACCCCCCTGTAGGAACGGCTTTAGCCGCGAAGAG > 4:243417/1‑149 TAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGATGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGG > 1:45886/1‑149 AGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC > 3:94180/1‑149 GCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGC > 3:268716/1‑148 GCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGA > 6:322121/1‑145 GCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGA < 5:322121/145‑1 GCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGAC > 3:256987/1‑149 AAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCA > 2:239415/1‑148 G‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCT < 6:210463/140‑1 G‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCT > 5:210463/1‑140 CCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCA < 4:256987/149‑1 TTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGAAGGCGCCATCGGGCTCAACTTCAGCAGTGCGGTACCCACCA > 8:308744/1‑148 GCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGT > 3:52434/1‑148 GCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGG < 2:174927/113‑1 GCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGG > 1:174927/1‑113 CGAAGAGGCCAGTAGCCGAAGCGCAGATAAGCGCTTGTTGGCGAGAAGGTACAGGCACACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGAAGGCGCCATCGGGCTCACCTTCAGCAGTTCGGTCACCACCATCAGCGT > 2:257649/1‑147 AAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGC > 3:55715/1‑149 AGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCG > 4:196233/1‑149 AGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCG > 7:302067/1‑149 GCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCAAAGGCGTCAGCCCGC > 3:179796/1‑148 CCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCC > 6:26128/1‑148 AGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCA > 7:87324/1‑147 GTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAG < 1:239415/149‑1 GCCTGTGCGCCGTCGGTCTAGCCGTGGGCCTGTACCTGCTCGCCAACAAGCGCTGATCTGCGCTTCGGCTACTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGG‑TTAGGTGTCGGCCTTGAGGCCTGTGCAAA‑CCCCCTGTAGGAACGGCTTTAGCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6077991‑6077821‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctttagccgcgaagaggccagTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCACGGCTAGACCGACGGCGCACAGGCCTGCCACGTAGTAGGCAGGCGCCATCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAG > NC_002947/6077921‑6078068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |