New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1030530 =	55 (1.020)	3 (0.060)	3/240	NT	5.5%	coding (588/1353 nt)	PP_0887	sensor histidine kinase
	?	NC_002947	1030592 =	53 (1.060)					coding (650/1353 nt)	PP_0887	sensor histidine kinase

CGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCG  >  NC_002947/1030382‑1030672                                                                                                                                                     |                                                                                                                                               cGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGcc                                                                                                                                                >  3:171931/1‑149 (MQ=255)  tgtggtcctggcgcatttcgttgatcagcacgctcatggtcgccagcggcgtacccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgatcc                                                                                                                                               <  6:114410‑M1/2‑1 (MQ=255)      gtcctggcgcatttcgttgatcagcacgctcatggtctccagcggcgtacccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTggc                                                                                                                                           <  1:235028‑M1/6‑1 (MQ=255)       tcctggcgcatttcgttgatcagcacgctcatggtcgccagcggcgtacccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTggcg                                                                                                                                          >  6:165336‑M1/143‑149 (MQ=255)       ccTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTggcg                                                                                                                                          >  4:130691/1‑149 (MQ=255)         ctggcgcatttcgttgatcagcacgctcatggtcgccagcggcgtacccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTggcggc                                                                                                                                        <  5:153260‑M1/9‑1 (MQ=255)         ctggcgcatttcgttgatcagcacgctcatggtcgccagcggcgtacccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTggcggc                                                                                                                                        >  2:142476‑M1/141‑149 (MQ=255)         ctggcgcatttcgttgatcagcacgctcatggtcaccagcggcgtacccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggcattcttcacgccgctctgaacgcagctgctCCTggcggc                                                                                                                                        <  5:85516‑M1/9‑1 (MQ=255)                          gCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCtttt                                                                                                                       >  7:195250/1‑149 (MQ=255)                           cTGATCCTGTCGGGCATTGCGGTGACGGCCTACTGCTTGCTTCTGGTGCAGTTCTACCCGCTCGAAGTGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGTCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCttttt                                                                                                                      <  7:124461/149‑1 (MQ=255)                           cTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCGCGAAGGGCTGCCGATGGCGCGGGACAAGATGCCGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCttttt                                                                                                                      <  1:313243/149‑1 (MQ=255)                              aTCCTGTCGGGGATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCGGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCtttttt                                                                                                                     <  1:319378/147‑1 (MQ=255)                              aTCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCtgt                                                                                                                                  <  7:185309/134‑1 (MQ=255)                              aTCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCtgt                                                                                                                                  >  8:185309/1‑134 (MQ=255)                                ccTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCcg                                                                                                                 >  7:316247/1‑149 (MQ=255)                                   gTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCcgcgc                                                                                                              >  1:182486/1‑149 (MQ=255)                                    tCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCtgt                                                                                                                                  >  4:78367/1‑128 (MQ=255)                                    tCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCtgt                                                                                                                                  <  3:78367/128‑1 (MQ=255)                                         caatGCGCAGACGGCCTCCAGCATGCAGCTGGTGCAGTTCTACCCCCACGAAGGGCTGCCGATCGCGCTCGAAAAGAGTCATGTCTACGGCATGTAGCTGAGCATTGCCCTGGCGGCGCATGTGAGCCCCGGTATTCCCgcgcgcctcg                                                                                                        >  8:313967/4‑145 (MQ=255)                                               gcTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCg                                                                                                     >  4:43139/1‑146 (MQ=255)                                                 tGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAagag                                                                                                >  4:67809/1‑149 (MQ=255)                                                   aCGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAagag                                                                                                <  3:43139/147‑1 (MQ=255)                                                   aCGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGc                                                                                               <  8:195250/148‑1 (MQ=255)                                                     ggCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTgc                                                                                            >  6:171883/1‑149 (MQ=255)                                                       cccagttcatgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTgcg                                                                                           >  8:5203‑M1/95‑148 (MQ=255)                                                        cTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGcgcc                                                                                         >  3:153179/1‑149 (MQ=255)                                                             gCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAg                                                                                    <  8:316247/149‑1 (MQ=255)                                                              catgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAg                                                                                    >  2:163562‑M1/88‑148 (MQ=255)                                                               atgggcggcaccggcggcctgggtagccacagccagcagttgctcgtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTGGCGGCGGCCGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGa                                                                                  >  6:153260‑M1/87‑149 (MQ=255)                                                                  ctgctgGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGag                                                                                 >  3:192622/1‑147 (MQ=255)                                                                   tgctgGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGagcag                                                                              >  3:257769/1‑149 (MQ=255)                                                                   tgctgGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATAGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGagcag                                                                              >  5:114410/1‑149 (MQ=255)                                                                     ctgGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCt                                                                            <  1:261852/149‑1 (MQ=255)                                                                             gTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCag                                                                    <  4:257769/149‑1 (MQ=255)                                                                                 tACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAgcg                                                                >  7:119778/1‑149 (MQ=255)                                                                                 tACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAgcg                                                                >  6:85516/1‑149 (MQ=255)                                                                                   cccGCTAGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAgcggc                                                              <  4:171931/149‑1 (MQ=255)                                                                                    ccGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGagcagc                                                                             >  7:190137/1‑133 (MQ=255)                                                                                    ccGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGagcagc                                                                             <  8:190137/133‑1 (MQ=255)                                                                                                   ccGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGATCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGAGCATGGCCGAAGAGCTGCGCAGCCAGGAGCAGCTGCGTTCAGAGCTGCGTGAAGAAAGCCTgc                                               <  2:132149/148‑1 (MQ=255)                                                                                                       tGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGcgac                                          <  3:130691/149‑1 (MQ=255)                                                                                                         gcgcGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGcgacga                                        >  2:128329/1‑149 (MQ=255)                                                                                                          cgcgGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAg                                       <  3:67809/149‑1 (MQ=255)                                                                                                           gcgGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGc                                      <  4:153179/149‑1 (MQ=255)                                                                                                                aCAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCCTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAActg                                 >  7:172086/1‑149 (MQ=255)                                                                                                                  aaGATGCAGGTCTACGGCATGTCGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACTTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGAGAAGAAAGCCTGCGCGACGAGCAActgct                               >  6:28918/1‑149 (MQ=255)                                                                                                                    gATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTgctgg                             <  5:247841/149‑1 (MQ=255)                                                                                                                    gATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTgctgg                             <  2:182486/149‑1 (MQ=255)                                                                                                                       gCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCa                                                                                     >  6:9885/1‑90 (MQ=255)                                                                                                                       gCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCa                                                                                     <  1:97515/90‑1 (MQ=255)                                                                                                                       gCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCa                                                                                     >  2:97515/1‑90 (MQ=255)                                                                                                                       gCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCa                                                                                     <  5:9885/90‑1 (MQ=255)                                                                                                                         aGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCtgtg                        <  4:192622/149‑1 (MQ=255)                                                                                                                              tACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTAc                   >  7:153959/1‑149 (MQ=255)                                                                                                                                cGGCATCTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCaaa                                   >  8:24973/1‑130 (MQ=255)                                                                                                                                 ggCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGaa                                                                                                   <  5:23527/66‑1 (MQ=255)                                                                                                                                 ggCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGaa                                                                                                   >  6:23527/1‑66 (MQ=255)                                                                                                                                     tgtgGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGgcc            <  8:153959/149‑1 (MQ=255)                                                                                                                                       tgGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTgaaga                                                       <  5:90429/104‑1 (MQ=255)                                                                                                                                       tgGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTgaaga                                                       >  6:90429/1‑104 (MQ=255)                                                                                                                                          cTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGc                                      >  7:307641/1‑118 (MQ=255)                                                                                                                                          cTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGc                                      <  8:307641/118‑1 (MQ=255)                                                                                                                                           tGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGt      >  1:343083/1‑149 (MQ=255)                                                                                                                                           tGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGt      >  2:31633/1‑149 (MQ=255)                                                                                                                                               cATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCAAGGCCGCCGGTgccg  >  4:261002/1‑149 (MQ=255)                                                                                                                                                    cccTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTgctggct                           >  2:147037/1‑119 (MQ=255)                                                                                                                                                    cccTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTgctggct                           <  1:147037/119‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               CGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCG  >  NC_002947/1030382‑1030672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.