New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1574448 =	61 (1.130)	6 (0.120)	8/248	NT	9.4%	intergenic (+11/+42)	pcaC/pcaP	4‑carboxymuconolactone decarboxylase/porin
	?	NC_002947	1574480 =	58 (1.120)					intergenic (+43/+10)	pcaC/pcaP	4‑carboxymuconolactone decarboxylase/porin

AACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTCCGCCACCA  >  NC_002947/1574300‑1574596                                                                                                                                                     |                                                                                                                                                      atcaaTGGAGTGTCCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCGAATGCGACGTTCCTCCTGGCTGAGTCTGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCAc                                                                                                                                                       <  6:184893/147‑1 (MQ=255)    agcggcctgatcatcgggccactgttcgtggtggcggaagctgcgttcatgctgggcctgtgcccgaccctgaagcgcgccgtggaagccaacgccggcccgattgccatgcggcaaaaaaaggcatcggtgtaaaggccattcgCggg                                                                                                                                                    >  3:5029‑M1/146‑149 (MQ=255)          gTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGc‑c                                                                                                                                             >  6:79062/1‑149 (MQ=255)             aCCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCt                                                                                                                                          <  5:79062/149‑1 (MQ=255)                atcgggccactgttcgtggtggcggaagctgcgttcatgctgggcctgtgcccgaccctgaagcgcgccgtggaagccaacgccggcccgattgccatgcggcaaaaaaaggcatcggtgtaaaggccattcgCGGGCAGGC‑CCCTGc                                                                                                                                        <  7:237651‑M1/15‑1 (MQ=255)                 tcgggccactgttcgtggtggcggaagctgcgttcatgctgggcctgtgcccgaccctgaagcgcgccgtggaagccaacgccggcccgattgccatgcggcaaaaaaaggcatcggtgtaaaggccattcgCGGGCAGGC‑CCCTGCaa                                                                                                                                      <  5:215878‑M1/17‑1 (MQ=255)                 gcgACGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCaa                                                                                                                                      <  8:214490/149‑1 (MQ=255)                     gccactgttcgtggtggcggaagctgcgttcatgctgggcctgtgcccgaccctgaagcgcgccgtggaagccaacgccggcccgattgccatgcggcaaaaaaaggcatcggtgtaaaggccattcaCGGGCAGGC‑CCCTGCGACAgg                                                                                                                                  <  6:220935‑M1/21‑1 (MQ=255)                     cgaGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAgg                                                                                                                                  <  1:117520/149‑1 (MQ=255)                      gagaTCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAggg                                                                                                                                 >  6:207161/1‑149 (MQ=255)                        gaTCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGgcg                                                                                                                               >  6:50985/1‑149 (MQ=255)                            aaGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGgcgc                                                                                                                              <  4:50640/146‑1 (MQ=255)                            aaGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGgcgc                                                                                                                              >  3:50640/1‑146 (MQ=255)                            aaGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCtt                                                                                                                            <  6:37734/148‑1 (MQ=255)                                aaGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATTACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCcg                                                                                                                       <  6:346511/149‑1 (MQ=255)                                     cTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAAt                                                                                                                  >  2:130993/1‑149 (MQ=255)                                       gATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATgg                                                                                                                >  8:135975/1‑149 (MQ=255)                                       gATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCCGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGTGCAGGC‑CCATGCAACAGGGCGCTTGCCAGCGAATgg                                                                                                                >  6:325515/1‑149 (MQ=255)                                        aTGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCCGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGc                                                                                                               <  5:325515/149‑1 (MQ=255)                                            agagCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCtt                                                                                                            >  2:146021/1‑148 (MQ=255)                                            agagCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGATCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCtt                                                                                                            >  5:96490/1‑148 (MQ=255)                                                cgcgATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCTGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCtt                                                                                                            <  5:66860/144‑1 (MQ=255)                                                cgcgATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCTGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCtt                                                                                                            >  6:66860/1‑144 (MQ=255)                                                cgcgATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTacac                                                                                                       <  1:130993/149‑1 (MQ=255)                                                      cTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTg                                                                                                                                         >  7:108309/1‑109 (MQ=255)                                                      cTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTg                                                                                                                                         <  8:108309/109‑1 (MQ=255)                                                          tGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCttt                                                                                             >  7:90076/1‑149 (MQ=255)                                                            cGGCATTCCGGCGGCCAATGCCACGATCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCtttt                                                                                            <  6:96490/148‑1 (MQ=255)                                                            cGGCATTAGGGCGGCCAATGCCTCGTTCGACGTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGGCTCGCCAGTATATCGTGATCACGGGCAGGG‑CCCTGCAACTGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCttttt                                                                                           <  7:127418/149‑1 (MQ=255)                                                              gCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCttttttt                                                                                         <  2:90053/149‑1 (MQ=255)                                                                aTTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGc                                                                                       >  6:155752/1‑149 (MQ=255)                                                                 ttCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGcc                                                                                      >  5:188076/1‑149 (MQ=255)                                                                 ttCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGcc                                                                                      <  5:207161/149‑1 (MQ=255)                                                                 ttCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGAGGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGcc                                                                                      >  1:249657/1‑149 (MQ=255)                                                                     ggcggcCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCAt                                                                                  >  6:67513/1‑149 (MQ=255)                                                                           cAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CACTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAAt                                                                            >  8:179631/1‑149 (MQ=255)                                                                            aaTGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTg                                                                                        <  2:9987/136‑1 (MQ=255)                                                                            aaTGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTg                                                                                        <  2:246486/136‑1 (MQ=255)                                                                            aaTGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTg                                                                                        >  1:9987/1‑136 (MQ=255)                                                                            aaTGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTg                                                                                        >  1:246486/1‑136 (MQ=255)                                                                             aTGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCg                                                                          <  5:50985/149‑1 (MQ=255)                                                                             aTGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCg                                                                          >  7:24916/1‑149 (MQ=255)                                                                                        cACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTg                                                               <  2:125781/149‑1 (MQ=255)                                                                                        cACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTg                                                               <  7:135975/149‑1 (MQ=255)                                                                                         aCCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATgg                                                                                                                >  4:154588/1‑99 (MQ=255)                                                                                              gCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCACCAGGGCGCTTGCCCGCGAATGGCCTTTACCACGATGCCTTTTTTTGCCGCATGGCAATCGGCCAGGCGTTGGCTTcc                                                         >  6:184859/1‑149 (MQ=255)                                                                                                       gtgtGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGgcgcgc                                                >  6:71069/1‑149 (MQ=255)                                                                                                        tgtgGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCt                                               >  2:279251/1‑149 (MQ=255)                                                                                                         gtgGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCtt                                              <  5:67513/149‑1 (MQ=255)                                                                                                            ggATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAg                                           >  5:72963/1‑149 (MQ=255)                                                                                                                   cTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCggg                                    <  2:249657/149‑1 (MQ=255)                                                                                                                   cTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCggg                                    <  6:72963/149‑1 (MQ=255)                                                                                                                       gCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGca                                  >  7:46057/1‑147 (MQ=255)                                                                                                                         gTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAgg                              >  1:42973/1‑149 (MQ=255)                                                                                                                         gTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGATGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAgg                              >  4:221533/1‑149 (MQ=255)                                                                                                                               tctcGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAg                         >  5:70642/1‑148 (MQ=255)                                                                                                                                ctcGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCa                       <  1:146021/149‑1 (MQ=255)                                                                                                                                 tcGCCAGTAAACGGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCgg                                     <  3:177323/134‑1 (MQ=255)                                                                                                                                 tcGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCggg                                    >  6:291255/1‑135 (MQ=255)                                                                                                                                 tcGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCgg                                     >  4:177323/1‑134 (MQ=255)                                                                                                                                 tcGCCAGTAAACCCTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCTCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCggg                                    <  5:291255/135‑1 (MQ=255)                                                                                                                                 atcggtgtaaaggccattcgCGGGCAAGCGCCCTGTTGCAGGG‑GCCTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCAt                      <  6:215878‑M1/129‑1 (MQ=255)                                                                                                                                   gCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCAt                      <  7:179631/147‑1 (MQ=255)                                                                                                                                   gCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATg                     >  3:326853/1‑148 (MQ=255)                                                                                                                                       gTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACg                 >  4:66076/1‑148 (MQ=255)                                                                                                                                          aaCCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGc             >  4:277729/1‑149 (MQ=255)                                                                                                                                           aCCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCt            >  4:275942/1‑149 (MQ=255)                                                                                                                                              ccattcgCGGGCAAGCGCCCTGTTGCAGGG‑GCCTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTcc         <  8:237651‑M1/142‑1 (MQ=255)                                                                                                                                               cattcgCGGGCAAGCGCCCTGTCGCAGGG‑GCCTGCCCGTGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTCCg        <  5:220935‑M1/143‑1 (MQ=255)                                                                                                                                                attcgCGGGCAAGCGCCCTGTTGCAGGG‑GCCTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCa               <  7:309120‑M1/136‑1 (MQ=255)                                                                                                                                                attcgCGGGCAAGCGCCCTGTTGCAGGG‑GCCTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCa               >  8:309120‑M1/6‑141 (MQ=255)                                                                                                                                                  tCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAgg                                          >  2:308220/1‑112 (MQ=255)                                                                                                                                                  tCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTCCGcca     >  4:168724/1‑149 (MQ=255)                                                                                                                                                  tCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTCCGcca     >  6:110826/1‑149 (MQ=255)                                                                                                                                                   cACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTCCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGCCGCGCTTCAGCGTCGGCCACAGTCCCAGCATGAACGCAGCTTCCGccac    >  6:186039/1‑149 (MQ=255)                                                                                                                                                     CGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTCCGccacca  >  3:66076‑M1/1‑149 (MQ=255)                                                                                                                                                     CGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGACCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGaa                   <  6:301785‑M1/132‑1 (MQ=255)                                                                                                                                                     CGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGACCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGaa                   >  5:301785‑M1/1‑132 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AACAATGGCGTGACCCGCGACGAGATCAAGGAAGTGCTGATGCAGAGCGCGATCTACTGCGGCATTCCGGCGGCCAATGCCACGTTCCACCTGGCTGAGTCGGTGTGGGATGAACTTGGCGTAGAGTCTCGCCAGTAAACCGTGATCACGGGCAGGC‑CCCTGCAACAGGGCGCTTGCCCGCGAATGGCCTTTACACCGATGCCTTTTTTTGCCGCATGGCAATCGGGCCGGCGTTGGCTTCCACGGCGCGCTTCAGGGTCGGGCACAGGCCCAGCATGAACGCAGCTTCCGCCACCA  >  NC_002947/1574300‑1574596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.