New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2338988 =	45 (0.830)	4 (0.080)	4/248	NT	8.6%	coding (781/1080 nt)	PP_2055	isomerase
	?	NC_002947	2339036 =	42 (0.810)					coding (829/1080 nt)	PP_2055	isomerase

GAAACCCCGGCTCAGCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGGCGCGCAGCAACTGG  >  NC_002947/2338841‑2339129                                                                                                                                                    |                                                                                                                                              gcgcgtcagcgcaacatcgatgccgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaagg                                                                                                                                              <  6:226695‑M1/2‑1 (MQ=255) gAAACCCCGGCTCAGCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACgg                                                                                                                                              <  5:144358/149‑1 (MQ=255)  cgcgtcagcgcaacatcgatgccgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaagg                                                                                                                                              >  8:200470‑M1/147‑148 (MQ=255)  cgcgtcagcgcaacatcgatgccgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaagg                                                                                                                                              >  6:315952‑M1/147‑148 (MQ=255)    cgtcagcgcaacatcgatgccgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCAc                                                                                                                                           >  7:235437‑M1/145‑149 (MQ=255)      cccAGCTCAGCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGc                                                                                                                                         >  3:266987/1‑149 (MQ=255)       ccGGCTCAGCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCt                                                                                                                                        <  8:176363/149‑1 (MQ=255)         ggCTCAGCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGc                                                                                                                                      <  2:104559/149‑1 (MQ=255)             aacatcgatgccgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCAc                                                                                                                                           >  5:168709‑M1/136‑140 (MQ=255)             aacatcgatgccgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCAc                                                                                                                                           <  6:168709‑M1/5‑1 (MQ=255)               gCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTc                                                                                                                                <  3:202536/149‑1 (MQ=255)                cTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCg                                                                                                                               >  1:145852/1‑149 (MQ=255)                       ccAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTc                                                                                                                        <  2:145852/149‑1 (MQ=255)                        cgccacttgggtgctccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCACGCTGCAGGTTCGCTATTTCa                                                                                                                       <  5:170262‑M1/25‑1 (MQ=255)                        cAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCa                                                                                                                       >  3:58673/1‑149 (MQ=255)                        cAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCa                                                                                                                       >  2:219226/1‑149 (MQ=255)                        cAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCa                                                                                                                       >  5:226695/1‑149 (MQ=255)                          aCAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATg                                                                                                                     <  1:219226/149‑1 (MQ=255)                            aGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTacgacg                                                                                                                                               >  4:114460/1‑121 (MQ=255)                            aGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTacgacg                                                                                                                                               <  3:114460/121‑1 (MQ=255)                                 gctgctCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGcac                                                                                                               >  3:313/1‑148 (MQ=255)                                      tccaggcggacctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGc                                                                                                         <  4:143319‑M1/39‑1 (MQ=255)                                      tCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGc                                                                                                         <  4:58673/149‑1 (MQ=255)                                        gAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCa                                                                                                       >  5:16279/1‑149 (MQ=255)                                              cTGGATGCGTTGGGGCTGTAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTTGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGca                                                                                                                <  8:162668/134‑1 (MQ=255)                                              cTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGca                                                                                                                >  7:162668/1‑134 (MQ=255)                                              cTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGATACGACGGCACGCTGAAGGTTCGATATTTCATGCCGca                                                                                                                >  7:158156/1‑134 (MQ=255)                                                cctgggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCt                                                                                               >  6:170262‑M1/101‑149 (MQ=255)                                                   aGCGTTGCGGCTGAAGGCCGGAAAGGCCATTGGGCTTGGCGATGTGAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTgg                                                                                            <  6:244342/149‑1 (MQ=255)                                                    ggccagttgctgcgcgccttcgcccaacaggtcggcaatcacggtgccagggctgacgcaggcagtcgccagccccaccgctccagtgatcgccaaGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGc                                                                                           >  3:143319‑M1/97‑149 (MQ=255)                                                           ggCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACt                                                                                    >  6:233465/1‑149 (MQ=255)                                                              tGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTg                                                                                   >  7:179376/1‑147 (MQ=255)                                                                  ggCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCgg                                                                             >  6:150566/1‑149 (MQ=255)                                                                       gAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTgggg                                                                        <  5:150566/149‑1 (MQ=255)                                                                                    ccTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCgg                                                                             <  5:271071/131‑1 (MQ=255)                                                                                    ccTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTAATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCgg                                                                             >  6:271071/1‑131 (MQ=255)                                                                                        ggCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGActgcctgc                                                         <  4:289944/147‑1 (MQ=255)                                                                                        ggCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGt                                                       <  8:179376/149‑1 (MQ=255)                                                                                             tGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGcc                                                  <  4:258921/149‑1 (MQ=255)                                                                                                cAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTg                                               >  8:154158/1‑149 (MQ=255)                                                                                                    ggCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCAc                                           >  3:123277/1‑149 (MQ=255)                                                                                                     gCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCAcc                                          >  8:205901/1‑149 (MQ=255)                                                                                                             aTCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTg                                   <  6:16340/148‑1 (MQ=255)                                                                                                             aTCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGc                                  >  4:200335/1‑149 (MQ=255)                                                                                                              tCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGcc                                 <  4:266987/149‑1 (MQ=255)                                                                                                               ccccAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTg                                   >  7:311050/1‑146 (MQ=255)                                                                                                               ccccAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTg                                   <  8:311050/146‑1 (MQ=255)                                                                                                                 ccAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGAc                              <  4:123277/149‑1 (MQ=255)                                                                                                                     gCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGt                          <  5:233465/149‑1 (MQ=255)                                                                                                                       cAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGtt                         <  4:313/148‑1 (MQ=255)                                                                                                                                  tCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTggg                      >  3:88524/1‑140 (MQ=255)                                                                                                                                  tCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTggg                      <  4:88524/140‑1 (MQ=255)                                                                                                                                  tCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGgcgc             >  5:266072/1‑149 (MQ=255)                                                                                                                                    cAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTgggg                                                                        <  4:193630/88‑1 (MQ=255)                                                                                                                                    cAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGgcgcg            >  3:126868/1‑148 (MQ=255)                                                                                                                                     aaGCCGCGCTACGACGGCACGCTGCAGGATCGCTATTTCATGCCGCACAACTCCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGGCGCgca          >  5:276221/1‑149 (MQ=255)                                                                                                                                      aGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGGCGCgcag         >  5:34852/1‑149 (MQ=255)                                                                                                                                             cTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGGCGCGCAGCAACTgg  <  7:154158/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                              GAAACCCCGGCTCAGCTGGACGCCAACAGCGCGCTGCTCGAACGCCTGGAAGCGTTGCGGCTGAAGGCCGGAAAGGCCATGGGCCTGGGCGATGTCAGTGGCATGGTCATCCCCAAGCCAGTGCTGGTGTCCAAGCCGCGCTACGACGGCACGCTGCAGGTTCGCTATTTCATGCCGCACAACTGCCATCGTGCCTTGGCGATCACTGGAGCGGTGGGGCTGGCGACTGCCTGCGTCAGCCCTGGCACCGTGATTGCCGACCTGTTGGGCGAAGGCGCGCAGCAACTGG  >  NC_002947/2338841‑2339129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.