New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2404685 =	29 (0.540)	5 (0.100)	5/246	NT	13.1%	coding (30/240 nt)	PP_2107	hypothetical protein
	?	NC_002947	2404717 =	39 (0.760)					coding (62/240 nt)	PP_2107	hypothetical protein

GCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTGCGGCGCTGTG  >  NC_002947/2404538‑2404830                                                                                                                                                    |                                                                                                                                                  gcgGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCAccc                                                                                                                                                  >  1:2473/1‑149 (MQ=255)         gTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGc                                                                                                                                          >  5:147800/1‑149 (MQ=255)                 aCCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTg                                                                                                                                  <  2:94948/149‑1 (MQ=255)                   cGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCACCCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGc                                                                                                                                 >  2:96099/1‑148 (MQ=255)                       ggcgccgttgtcacagcgccgcagcacggtaattagcagcacttaacgctcgaacaaaggctcgctctcggcgatgtcgaccagctctaccagcaggccatgatcgaccagaggcatcaacacagCCTCGGC‑‑‑CACCTCTGCGAAGTGGc                                                                                                                         >  1:287444‑M1/126‑149 (MQ=255)                           ccgttgtcacagcgccgcagcaccggaatgatcaggccataacgctcgaacaaaggctcgctctcggcgatgtcgaccagctctaccagcaggccatgatcgaccagaggcatcaacacagCCTCGGC‑‑‑CACCTCTGCGAAGTGGCCGAg                                                                                                                     >  3:311393‑M1/122‑149 (MQ=255)                                     cagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTgtgt                                                                                                              >  1:306900/1‑149 (MQ=255)                                         ccgcagcaccggaatgatcaggccataacgctcgaacaaaggctcgctctcggcgatgtcgaccagctctaccagcaggccatgatcgaccagaggcatcaacacagCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGAt                                                                                                          >  4:76867‑M1/108‑149 (MQ=255)                                         aTTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGAt                                                                                                          <  2:93598/149‑1 (MQ=255)                                         aTTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGAt                                                                                                          >  6:311613/1‑149 (MQ=255)                                            gAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGc                                                                                                        <  2:2473/148‑1 (MQ=255)                                              gCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCctc                                                                                                     >  4:181100/1‑149 (MQ=255)                                                      aggtGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGa                                                                                              <  5:311613/148‑1 (MQ=255)                                                                   gCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTgg                                                                                >  4:145740/1‑149 (MQ=255)                                                                    acgctcgaacaaaggctcgctctcggcgatgtcgaccagctctaccagcaggccatgatcgaccagaggcatcaacacagCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTgg                                                                                                  >  3:320882‑M1/81‑130 (MQ=255)                                                                    acgctcgaacaaaggctcgctctcggcgatgtcgaccagctctaccagcaggccatgatcgaccagaggcatcaacacagCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTgg                                                                                                  <  4:320882‑M1/50‑1 (MQ=255)                                                                               tataaTAGGCTTCTGTGTATGCCAACGCGGTACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCct                                                                                     <  6:182093/129‑1 (MQ=255)                                                                               tAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTTCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGACACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGCCct                                                                                     >  5:182093/1‑132 (MQ=255)                                                                                aGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGa                                                                   >  8:298268/1‑149 (MQ=255)                                                                                         ttCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGAt                                                                                                          >  4:300910/1‑101 (MQ=255)                                                                                         ttCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGcc                                                            >  1:190927/1‑147 (MQ=255)                                                                                           cTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCga                                                          <  6:147800/147‑1 (MQ=255)                                                                                                        cccGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGtt                                           <  2:41011/149‑1 (MQ=255)                                                                                                                         gctgcCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGa                          >  5:172266/1‑149 (MQ=255)                                                                                                                         gctgcCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGa                          >  8:113951/1‑149 (MQ=255)                                                                                                                            gcCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCa                       >  5:248931/1‑149 (MQ=255)                                                                                                                               tGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTc                    >  2:93326/1‑149 (MQ=255)                                                                                                                                 aaTGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTcc                   <  7:298268/148‑1 (MQ=255)                                                                                                                                    gTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGTCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGtg               >  7:214903/1‑149 (MQ=255)                                                                                                                                    gTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTgg                                                                                                  >  6:222410/1‑66 (MQ=255)                                                                                                                                       aaCTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAgagggagc                                                  <  8:32320/111‑1 (MQ=255)                                                                                                                                       aaCTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAgagcgagc                                                  >  7:32320/1‑111 (MQ=255)                                                                                                                                       aaCTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGtgctg            >  7:242054/1‑149 (MQ=255)                                                                                                                                            ttCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTgcggcg       >  4:129322/1‑149 (MQ=255)                                                                                                                                              cGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTGCGGCGCt     >  5:293006/1‑149 (MQ=255)                                                                                                                                               ggCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGGTATGGCCTGATCATTCCGGTGCTGCGGCGCtg    >  1:255416/1‑149 (MQ=255)                                                                                                                                                gCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTGCGGCGCtgt   >  3:79236/1‑149 (MQ=255)                                                                                                                                                 cACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTGCGGCGCtgtg  <  6:172266/149‑1 (MQ=255)                                                                                                                                                 cACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTGCGGCGCtgtg  <  6:248931/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGTTGATGCCTCTGGTCGATCATGGCCTGCTGGTAGAGCTGGTCGACATCGCCGAGAGCGAGCCTTTGTTCGAGCGTTATGGCCTGATCATTCCGGTGCTGCGGCGCTGTG  >  NC_002947/2404538‑2404830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.