New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2591383 =	62 (1.150)	4 (0.080)	4/250	NT	6.4%	coding (299/450 nt)	PP_2269	N‑acetylmuramoyl‑L‑alanine amidase
	?	NC_002947	2591422 =	58 (1.120)					coding (338/450 nt)	PP_2269	N‑acetylmuramoyl‑L‑alanine amidase

ATCCGCCGCAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTGGGTAGCGGCCAAC  >  NC_002947/2591238‑2591528                                                                                                                                                  |                                                                                                                                                  aTCCGCCGCAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGcc                                                                                                                                                >  1:223198/1‑149 (MQ=255) aTCCGCCGCAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGcc                                                                                                                                                >  7:188961/1‑149 (MQ=255)  tCCGCCGCAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGccc                                                                                                                                               >  8:20078/1‑149 (MQ=255)   ccgccgCAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGccc                                                                                                                                               >  4:26445/1‑148 (MQ=255)     gccgcAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAg                                                                                                                                            >  3:31191/1‑149 (MQ=255)         tatccaactgagggcccacgactcttataagttggccgctacccacggtttaacgtcgaagctcgggcaagccttggctactttcgggaagtcccggtggccttggattgtcgcgctggggtatttctctttcagctCGCCCGAGCAGt                                                                                                                                        <  4:148843‑M1/12‑1 (MQ=255)            tGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTg                                                                                                                                     <  8:188961/149‑1 (MQ=255)             ggCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTg                                                                                                                                     >  1:324853/1‑148 (MQ=255)                gtggtgGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTACGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGAGGACATCAACGTCCCAGAAAACAACTTCACGCCAGAGCAGTTAGAAAg                                                                                                                                 >  2:32262/1‑149 (MQ=255)                    tggAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGtctc                                                                                                                             <  2:223198/149‑1 (MQ=255)                     ggaggaGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGtctc                                                                                                                             >  2:123290/1‑148 (MQ=255)                       aggaggGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCAATAACATCAACTCCGTAGGCATTTGGATTGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAAGAACTTAACGCCCGAGCAGTTTGCAAGTCTCaa                                                                                                                           <  3:238057/148‑1 (MQ=255)                        ggaggGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAg                                                                                                                          >  8:109250/1‑148 (MQ=255)                              ccGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACctgc                                                                                                                   >  7:210778/1‑149 (MQ=255)                              ccGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACctgc                                                                                                                   <  3:12096/149‑1 (MQ=255)                                      agttggccgctacccacggtttaacgtcgaagctcgggcaagccttggctactttcgggaagtcccggtggccttggattgtcgcgctggggtatttctctttcagctCGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAg                                                                                                           >  3:148843‑M1/109‑149 (MQ=255)                                        gATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGc                                                                                                          <  3:26445/148‑1 (MQ=255)                                        gATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCt                                                                                                         >  2:266897/1‑149 (MQ=255)                                        gATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCt                                                                                                         <  4:93680/149‑1 (MQ=255)                                             aaTCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGa                                                                                                       >  8:292267/1‑146 (MQ=255)                                             aaTCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAag                                                                                                    <  7:292267/149‑1 (MQ=255)                                             aaTCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAag                                                                                                    <  3:244352/149‑1 (MQ=255)                                             aaTCGGCGCCCACGTAGAGGGCAATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACACCCGAGCAGTTAGCAAGTCTCAAGCACCTGCTGGGCGAGCTGa                                                                                                       >  8:60347/1‑146 (MQ=255)                                               tCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAagag                                                                                                  <  2:324853/149‑1 (MQ=255)                                                       cACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCaa                                                                                                                                  <  8:223646/109‑1 (MQ=255)                                                       cACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCaa                                                                                                                                  >  7:223646/1‑109 (MQ=255)                                                         cGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCa                                                                                        <  5:819/149‑1 (MQ=255)                                                         cGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCa                                                                                        <  1:123290/149‑1 (MQ=255)                                                           tAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAgc                                                                                      <  3:90311/149‑1 (MQ=255)                                                                  ccATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACaa                                                                               >  6:98077/1‑149 (MQ=255)                                                                    aTAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATc                                                                             >  2:84815/1‑149 (MQ=255)                                                                       aCATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCaa                                                                          <  5:98077/149‑1 (MQ=255)                                                                         aTCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAgg                                                                        >  8:246595/1‑149 (MQ=255)                                                                            aaCTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCa                                                                     >  4:240039/1‑149 (MQ=255)                                                                                 cGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCgg                                                                 >  5:61453/1‑148 (MQ=255)                                                                                  gTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGa                                                               >  4:216147/1‑149 (MQ=255)                                                                                   tAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGAc                                                              <  4:31191/149‑1 (MQ=255)                                                                                      ctactttcgggaagtcccggtggccttggattgtcgcgctggggtatttctctttcagctCGCCCGAGCAGTTTGCAAGTCTCAAGCCCctgct                                                                                                                  <  6:69747‑M1/34‑1 (MQ=255)                                                                                      ctactttcgggaagtcccggtggccttggattgtcgcgctggggtatttctctttcagctCGCCCGAGCAGTTTGCAAGTCTCAAGCACctgct                                                                                                                  >  5:69747‑M1/61‑94 (MQ=255)                                                                                       cATTTGCATGGCCGGTTGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGGGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTcc                                                          <  1:32262/149‑1 (MQ=255)                                                                                          ttGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCaa                                                                                                                                  <  1:268202/74‑1 (MQ=255)                                                                                          ttGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCaa                                                                                                                                  >  2:268202/1‑74 (MQ=255)                                                                                            gCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGaa                                                      <  5:191457/148‑1 (MQ=255)                                                                                            gCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGaa                                                      <  5:186657/148‑1 (MQ=255)                                                                                            gCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGa                                                       >  8:93294/1‑147 (MQ=255)                                                                                             cATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGaaa                                                     <  1:266897/148‑1 (MQ=255)                                                                                             cATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGaaa                                                     <  7:60347/148‑1 (MQ=255)                                                                                               tGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTa                                                  <  7:109250/149‑1 (MQ=255)                                                                                                     gTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAg                                            <  3:216147/149‑1 (MQ=255)                                                                                                     gTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAg                                            >  4:219937/1‑149 (MQ=255)                                                                                                       ggAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGc                                          <  1:84815/149‑1 (MQ=255)                                                                                                           tCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGc                                      <  6:178385/149‑1 (MQ=255)                                                                                                           tCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGc                                      <  8:210778/149‑1 (MQ=255)                                                                                                               cGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGa                                  <  7:246595/149‑1 (MQ=255)                                                                                                               cGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGa                                  <  6:61453/149‑1 (MQ=255)                                                                                                                gAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAg                                 >  7:59251/1‑149 (MQ=255)                                                                                                                   gCGTACATCAACGTCCCCTAACACAACTACACGACCGCGCCCTTTGCAATTCTCAAGCACCTTCTGGGAGAGCTGAAAGAGAAATACCCAAGCCCGACAATCCAAGGCAACCGGGACTTCCCGAAAGTAGCCAAGTCTTGCCAGATCt                               <  6:326307/148‑1 (MQ=255)                                                                                                                    cGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTc                             <  7:20078/149‑1 (MQ=255)                                                                                                                        cATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACg                         >  2:229747/1‑149 (MQ=255)                                                                                                                             aCGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTaaa                    >  1:345231/1‑149 (MQ=255)                                                                                                                             aCGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTaaa                    <  3:219937/149‑1 (MQ=255)                                                                                                                                  cccGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGt                <  7:93294/148‑1 (MQ=255)                                                                                                                                  cccGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTg               <  3:240039/149‑1 (MQ=255)                                                                                                                                    cGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTggg             >  5:209032/1‑149 (MQ=255)                                                                                                                                        aacaacTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGc                                          <  5:155204/116‑1 (MQ=255)                                                                                                                                        aacaacTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGc                                          >  6:155204/1‑116 (MQ=255)                                                                                                                                        aacaacTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCg                                   >  8:91213/1‑123 (MQ=255)                                                                                                                                        aacaacTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCg                                   <  7:91213/123‑1 (MQ=255)                                                                                                                                           aacTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTGGGTAGCGGc      >  6:49613/1‑149 (MQ=255)                                                                                                                                           aacTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTGGGTAGCGGc      >  4:259263/1‑149 (MQ=255)                                                                                                                                             cTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTGGGTAGCGGcc     >  6:184484/1‑148 (MQ=255)                                                                                                                                               tCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTGGGTAGCGGCCAAc  >  7:293632/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                  ATCCGCCGCAATGGCGTGGTGGAGGAGGGCCGCGAGCTGGATCAAATCGGCGCCCACGTAGAGGGCCATAACATCAACTCCGTAGGCATTTGCATGGCCGGTGGAGTCACCGAGGCGGACATCAACGTCCCCGAAAACAACTTCACGCCCGAGCAGTTTGCAAGTCTCAAGCACCTGCTGGGCGAGCTGAAAGAGAAATACCCCAGCGCGACAATCCAAGGCCACCGGGACTTCCCGAAAGTAGCCAAGGCTTGCCCGAGCTTCGACGTTAAACCGTGGGTAGCGGCCAAC  >  NC_002947/2591238‑2591528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.