New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2729599 =	34 (0.630)	4 (0.080)	4/244	NT	11.0%	coding (46/1044 nt)	PP_2392	MFS transporter
	?	NC_002947	2729650 =	33 (0.650)					coding (97/1044 nt)	PP_2392	MFS transporter

CTGGCGCAGCGGCCAGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCT  >  NC_002947/2729456‑2729747                                                                                                                                                 |                                                                                                                                                     cTGGCGCAGCGGCCAGGTTTTCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCtt                                                                                                                                                  <  2:213013/148‑1 (MQ=255)   tcaggccccatgccaggccggccgcagcccccgtgaaaaagcgcagcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTgg                                                                                                                                                >  3:282764‑M1/143‑149 (MQ=255)    gcgcAGCGGCCAGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGc                                                                                                                                              <  8:939/149‑1 (MQ=255)    gcgcAGCGGCCAGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGc                                                                                                                                              <  8:266731/149‑1 (MQ=255)     aggccccatgccaggccggccgcagcccccgtgaaaaagcgcagcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTggg                                                                                                                                               >  5:239644‑M1/141‑148 (MQ=255)       gccccatgccaggccggccgcagcccccgtgaaaaagcgcagcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGc                                                                                                                                                     >  4:152240‑M1/139‑140 (MQ=255)       gccccatgccaggccggccgcagcccccgtgaaaaagcgcagcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGc                                                                                                                                                     <  3:152240‑M1/2‑1 (MQ=255)            atgccaggccggccgcagcccccgtgaaaaagcgcagcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTgg                                                                                                                                                >  4:237219‑M1/134‑140 (MQ=255)            atgccaggccggccgcagcccccgtgaaaaagcgcagcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTgg                                                                                                                                                <  3:237219‑M1/7‑1 (MQ=255)              cAGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGa                                                                                                                                    >  2:3528/1‑149 (MQ=255)               aGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCACAGGCGTATGCCTTGGGCTCGTTACTGa                                                                                                                                    <  1:3528/149‑1 (MQ=255)               aGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGAc                                                                                                                                   >  1:169935/1‑149 (MQ=255)                         cTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCg                                                                                                                         >  1:179077/1‑149 (MQ=255)                          ttGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGt                                                                                                                        >  2:28359/1‑149 (MQ=255)                            gCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGtt                                                                                                                       <  3:2200/148‑1 (MQ=255)                             ccGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTg                                                                                                                      <  7:225742/148‑1 (MQ=255)                                   cTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGGTCGTTACTGACCGCCATCCCGTTGGTGACg                                                                                                                <  1:28359/148‑1 (MQ=255)                                   cTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGt                                                                                                               <  2:169935/149‑1 (MQ=255)                                               agcaccagggtcagcgtgttggagttcgacaaggccgtcagcccgttgaacagcacgaagccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGc                                                                                                    >  1:260536‑M1/99‑149 (MQ=255)                                                aaTGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTg                                                                                                  >  3:126685/1‑149 (MQ=255)                                                 caccaggggcagcgtgttggagtgcgtcaaggccgtcagcccgttgaacagcacgatgccgatgatcgctagcaacagcgcccggcgccgataccaGCCTTGGGCTCGTTACTGCCCGCCATCCCGTTGGTGACGTTGACCCAAGGCTg                                                                                                  >  4:38356‑M1/97‑149 (MQ=255)                                                                         gTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTg                                                                         >  2:25944/1‑149 (MQ=255)                                                                          tCTGCTCGACCAGATAGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTgg                                                                        >  5:226351/1‑149 (MQ=255)                                                                               tCGACCAGATCGCCGATGGCTTGCACATCAGCCAGGCCATGGGTGGGCAATGGGTCAC‑GGCGTATCCCTTGGGCTCGTTTCTGACCGCCATCCCGTTGGTGACGTTGCCCCAAGGCTGGTATCGGCGCCGGGCGGTGTTGCTGGCGat                                                                    >  1:342276/1‑148 (MQ=255)                                                                                      gATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGt                                                                                                                        >  5:278500/1‑89 (MQ=255)                                                                                      gATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGt                                                                                                                        <  6:278500/89‑1 (MQ=255)                                                                                          gCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGt                                                        <  6:36555/149‑1 (MQ=255)                                                                                          gCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGt                                                        >  5:36555/1‑149 (MQ=255)                                                                                            cGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGc                                                      <  2:179077/149‑1 (MQ=255)                                                                                               gggCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGt                                                   <  6:226351/148‑1 (MQ=255)                                                                                                     gCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACg                                             >  4:124167/1‑149 (MQ=255)                                                                                                      cacaTCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGGTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACg                                             <  1:25944/148‑1 (MQ=255)                                                                                                           ccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCt                                                                                                   >  4:287856‑M1/39‑90 (MQ=255)                                                                                                           ccgatgatcgccagcaacagcgcccggcgccgataccaGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCt                                                                                                   <  3:287856‑M1/52‑1 (MQ=255)                                                                                                               cAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGc                                   <  4:126685/149‑1 (MQ=255)                                                                                                                  gCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCtt                                >  1:264533/1‑149 (MQ=255)                                                                                                                    cATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGACTTGt                              >  5:14520/1‑149 (MQ=255)                                                                                                                     aTGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTc                             >  8:110063/1‑149 (MQ=255)                                                                                                                          tcagCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTCACCGCCATCCCGATGGTGACGATGACCCAAGGCTGGTATCGGCGCCGGGCGCTCTTGCTGGAGATCAAAGCCTTACTGCAGATCAACGGGCTGACGGCCTTGTCCAAca                        >  8:93874/4‑148 (MQ=255)                                                                                                                             gCAATGGGTCAC‑GGAGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTcc                      >  7:293172/1‑148 (MQ=255)                                                                                                                              cAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCaa                    >  5:259663/1‑149 (MQ=255)                                                                                                                               aaTGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCaa                    >  1:159379/1‑148 (MQ=255)                                                                                                                                  gggTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACg                >  4:223995/1‑149 (MQ=255)                                                                                                                                   ggTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGc               <  6:259663/149‑1 (MQ=255)                                                                                                                                    gTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAGCTCCAACACGCt              >  8:50506/1‑149 (MQ=255)                                                                                                                                                 GCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGtgct  <  4:217901‑M1/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CTGGCGCAGCGGCCAGGTTTCCAGCTTGCCGTTGCTGGGGAAGCGATAATGCAGGCAGGTATGCGCCGGCGGGTCTGCTCGACCAGATCGCCGATGGCATGCACATCAGCCAGGCCATGGCTGGGCAATGGGTCAC‑GGCGTATGCCTTGGGCTCGTTACTGACCGCCATCCCGTTGGTGACGTTGACCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCT  >  NC_002947/2729456‑2729747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.