New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2914562 | 45 (0.830) | 4 (0.080) | 4/250 | NT | 8.6% | coding (3582/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
? | NC_002947 | = 2914625 | 42 (0.810) | coding (3645/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
CCGGTTCGGCCTACGCCGATGTGCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTGGCGACGTCAACCACACCGGCC > NC_002947/2914414‑2914710 | ccGGTTCGGCCTACGCCGATGTGCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACC < 2:74787‑M1/149‑1 (MQ=255) cGGTTCGGCCTACGCCGATGTGCTCACGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCccacca > 7:206400/1‑149 (MQ=255) gTTCGGCCTACGCCGATGTGCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCaccacc < 3:211035/149‑1 (MQ=255) cTACGCCGATGTGCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTg > 3:216833/1‑149 (MQ=255) gATGTGCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCgg > 2:125618/1‑149 (MQ=255) tgCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCg < 8:50133/144‑1 (MQ=255) tgCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCg > 7:50133/1‑144 (MQ=255) tCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCccggccttcgatcaggtcgctgc > 3:224106‑M1/1‑125 (MQ=255) tCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAAcat > 2:243189/1‑148 (MQ=255) aaGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTTGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAAc < 6:314532/144‑1 (MQ=255) aaGGGCGACGACGTCGATGCCGTGACCATACTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGAGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAAcaacat > 5:314532/1‑149 (MQ=255) gCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGc > 4:86958/1‑130 (MQ=255) gCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGc < 3:86958/130‑1 (MQ=255) gacgTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTcggcgg > 3:271948/1‑149 (MQ=255) gTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCaa < 1:243189/149‑1 (MQ=255) tGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCa < 3:325622/149‑1 (MQ=255) gACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGAcc > 6:306007/1‑149 (MQ=255) cATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGa > 7:309562/1‑149 (MQ=255) tcAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATg < 4:62199/119‑1 (MQ=255) tcAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATg > 3:62199/1‑119 (MQ=255) tcAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTcggc > 4:70865/1‑125 (MQ=255) tcAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTcggc < 3:70865/125‑1 (MQ=255) aaCCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAgg > 8:216789/1‑149 (MQ=255) aaCCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAg < 5:306007/148‑1 (MQ=255) ccATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGcc > 5:130675/1‑149 (MQ=255) tGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGg > 1:125618‑M2/1‑148 (MQ=255) tGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGg > 4:271948‑M2/1‑148 (MQ=255) cggcgCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGggtg > 6:130675‑M2/1‑145 (MQ=255) cgcCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCccggccttcgatcaggtcgctgccattgccgccgagcatgatgttgccggtggcaaagccggtggtgggc < 4:224106‑M1/149‑71 (MQ=255) cACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGAt > 4:35563/1‑148 (MQ=255) aCCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCccggccttcgatcaggtcgctgccattgccgccgagcatgatgttgccggtggcaaagccggtggtggg < 2:176937‑M1/144‑70 (MQ=255) aCCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCccggccttcgatcaggtcgctgccattgccgccgagcatgatgttgccggtggcaaagccggtggtggg > 1:176937‑M1/1‑75 (MQ=255) ggCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCt < 8:111649/149‑1 (MQ=255) gCAGTGCGCTGACCAACGTGGCGCTGATACGTGTGCTGCAGCAGTTCCTTGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCTACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGTGTGGCGATGACCTg < 8:206400/149‑1 (MQ=255) gCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTg < 7:216789/149‑1 (MQ=255) cAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTgg < 3:321379/149‑1 (MQ=255) cAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGAc > 8:290127/1‑148 (MQ=255) cAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGAc > 6:311233/1‑148 (MQ=255) aaCGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGAc > 1:236543/1‑147 (MQ=255) gcgcTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCt > 7:18687/1‑149 (MQ=255) cgcTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTc < 3:35563/149‑1 (MQ=255) aTACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTg > 7:100074/1‑123 (MQ=255) aTACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTg < 8:100074/123‑1 (MQ=255) cGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTgc < 2:236543/148‑1 (MQ=255) cGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTgc < 8:18687/148‑1 (MQ=255) gcagcaGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCg > 8:245361/1‑149 (MQ=255) cagcagTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCgt < 8:309562/149‑1 (MQ=255) cagTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTa > 7:144408/1‑149 (MQ=255) tCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTgc < 2:223947/132‑1 (MQ=255) tCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTgc > 1:223947/1‑132 (MQ=255) gCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTgg > 2:231294/1‑149 (MQ=255) cGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTGGc < 3:258723/149‑1 (MQ=255) ggATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCACCGTGCGCATCGCCGTGTACGCCCCTGGc > 4:258723/1‑148 (MQ=255) gCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGCCTAGTGGCTCACCGTGCGCATCGCAGTGTACGCCCCTGGCGACgg > 7:142678/1‑148 (MQ=255) ccGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTGGCGACGt < 7:245361/148‑1 (MQ=255) gCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGggtgggcaagccggcatccgccaggaactgctgcagcccacgtatcagcgccacgttggtcagcgcactgccggtggcg < 4:224106‑M2/149‑80 (MQ=255) cccACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGggtgggcaagccggcatccgccaggaactgctgcagcccacgtatcagcgccacgttggtcagcgcactgccggt > 1:176937‑M2/1‑69 (MQ=255) cccACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGggtgggcaagccggcatccgccaggaactgctgcagcccacgtatcagcgccacgttggtcagcgcactgccggt < 2:176937‑M2/144‑76 (MQ=255) ccaccaCCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTGGCGACGTCAACCACAcc > 4:319937/1‑149 (MQ=255) caccacCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACATGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTGGCGACGTCAACCACACCg > 6:317287/1‑149 (MQ=255) cACCccggccttcgatcaggtcgctgccattgccgccgagcatgatgttgccggtggcaaagccggtggtgggcaagccggcatccgccaggaactgctgcagcccacgtatcagcgccacgttggtcagcgcactgccggtggcgccg > 6:130675‑M1/1‑4 (MQ=255) cccggccttcgatcaggtcgctgccattgccgccgagcatgatgttgccggtggcaaagccggtggtgggcaagccggcatccgccaggaactgctgcagcccacgtatcagcgccacgttggtcagcgcactgccggtggcgccgcca > 4:271948‑M1/1‑1 (MQ=255) cccggccttcgatcaggtcgctgccattgccgccgagcatgatgttgccggtggcaaagccggtggtgggcaagccggcatccgccaggaactgctgcagcccacgtatcagcgccacgttggtcagcgcactgccggtggcgccgcca > 1:125618‑M1/1‑1 (MQ=255) | CCGGTTCGGCCTACGCCGATGTGCTCAAGGGCGACGACGTCGATGCCGTGACCATTCTCAACCATGGCGGCGCCACCGGCAGTGCGCTGACCAACGTGGCGCTGATACGTGGGCTGCAGCAGTTCCTGGCGGATGCCGGCTTGCCCACCACCGGCTTTGCCACCGGCAACATCATGCTCGGCGGCAATGGCAGCGACCTGATCGAAGGCCGGGGTGGCGATGACCTGGTCGATGGCGACAAGTGGCTCAACGTGCGCATCGCCGTGTACGCCCCTGGCGACGTCAACCACACCGGCC > NC_002947/2914414‑2914710 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |