New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2923293 | 48 (0.890) | 3 (0.060) | 3/244 | NT | 6.5% | coding (1960/2772 nt) | PP_2563 | antibiotic biosynthesis protein |
? | NC_002947 | = 2923329 | 42 (0.830) | coding (1924/2772 nt) | PP_2563 | antibiotic biosynthesis protein |
GGCTGACCTCGCTGGCGGGGAACCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGAT > NC_002947/2923146‑2923437 | ggCTGACCTCGCTGCCGGGGACCCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCCGCCGAATAACAGATGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGATCAGCGTGCGTGCATCGCCa > 6:326364/1‑149 (MQ=255) cTCGCTGGCGGGGAACCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCtt > 4:193882/1‑149 (MQ=255) cTGGCGGGGAACCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGAt < 5:53941/149‑1 (MQ=255) ggggAACCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGT‑‑‑ACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGa < 3:334802/149‑1 (MQ=255) ggggAACCAGTTGGAAACCAGCAGCAGCGATTGACAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCt > 1:42253/1‑149 (MQ=255) aCCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGc < 4:62911/149‑1 (MQ=255) aCCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGc < 7:291053/149‑1 (MQ=255) ccAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCt < 3:236492/149‑1 (MQ=255) aGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGa < 7:75268/149‑1 (MQ=255) gTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCtt < 8:41833/141‑1 (MQ=255) gTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCtt > 7:41833/1‑141 (MQ=255) aaaCCAGCAGCAGCGATAGCCAGTGCAGCGGGGCGAATTCCAGCTGGATCTATGCGCTGTACACCAGGGTTGGCACCACGATGGCTGTGAGTTGCGTGAGCAGGGTGCGTGGATCGCCACTCGCTTCGATGGCCTTGAGCTGAAAgcgc < 5:326364/149‑1 (MQ=255) cagcagcagCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGTATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAgcgcgc > 8:132891/1‑147 (MQ=255) cagcagcagCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAgcgcgc > 2:46125/1‑147 (MQ=255) agcagcagcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGc < 7:318573/128‑1 (MQ=255) agcagcagcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGc > 8:318573/1‑128 (MQ=255) cagcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcga > 1:161319‑M2/1‑144 (MQ=255) agcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgat > 1:46125‑M2/1‑143 (MQ=255) gcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatg > 2:304607‑M2/1‑142 (MQ=255) ccAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCctggcgcgctttcagctcaaggccatcgaagcgcgtggcgatgcacgcac < 5:22317‑M1/149‑51 (MQ=255) ccAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGgaga < 7:175594/149‑1 (MQ=255) aGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGAcc < 4:199426/149‑1 (MQ=255) aTACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAg < 2:166659/149‑1 (MQ=255) aTACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAg > 2:56177/1‑149 (MQ=255) cAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGttt > 7:19388/1‑149 (MQ=255) aTCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGa < 2:42253/148‑1 (MQ=255) cAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGCACAGCACCGAGGTTTCGCCGAGTa > 3:75262/1‑149 (MQ=255) aTGCGCTGTACAACAGGGTTGGCACCACGATGGCAGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATc > 1:225989/1‑149 (MQ=255) tGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCg < 2:225989/149‑1 (MQ=255) tGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCctggcgcgctttcagctcaaggccatcgaagcgcgtg < 8:61795‑M1/98‑38 (MQ=255) tGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCctggcgcgctttcagctcaaggccatcgaagcgcgtg > 7:61795‑M1/1‑61 (MQ=255) aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCgg < 6:19196/140‑1 (MQ=255) aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCgg > 5:19196/1‑140 (MQ=255) aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTc > 6:116407/1‑149 (MQ=255) aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGAATCGCCACTCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTACGCCGAGTATCGGCCAGTggac > 1:14734/1‑147 (MQ=255) aGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGa > 6:18198/1‑148 (MQ=255) gCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCAcc < 7:132891/148‑1 (MQ=255) accacGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAg > 4:117190/1‑149 (MQ=255) cacGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGt > 2:268010/1‑149 (MQ=255) acGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTg > 2:92303/1‑149 (MQ=255) aTGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGcc < 5:116407/149‑1 (MQ=255) tGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGAcc > 1:312567/1‑148 (MQ=255) tGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACca > 2:316677/1‑149 (MQ=255) gTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATc < 5:18198/149‑1 (MQ=255) ccTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGga < 3:117190/149‑1 (MQ=255) cTGAGCAGCGTGGGTGTATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGTCCACAATCAGgat < 2:14734/149‑1 (MQ=255) cgtgcgtgCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGc > 2:252183/1‑147 (MQ=255) cgtgcgtgCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGa < 1:268010/149‑1 (MQ=255) gtgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtacagcgcattgatccagctggtattcgcccggctgcactgg < 5:22317‑M2/149‑100 (MQ=255) gtgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAg > 4:242622/1‑149 (MQ=255) tgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGACAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAg > 2:268125/1‑148 (MQ=255) tgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGACAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAg > 2:272350/1‑148 (MQ=255) gcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCa > 2:221948/1‑149 (MQ=255) gcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATCCg > 5:10717/1‑149 (MQ=255) gcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACAAGGAACAGCACAGAGGTTTCGCCGAGTATCGGACAGTGGTCGAAATCAACCAGGTGGCAGACAACAATCAGGATGATGGCg > 1:246464/1‑141 (MQ=255) cATCGCCctggcgcgctttcagctcaaggccatcgaagcgcgtggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtacagcgcattgatccagctggtattcgcccggctgcactggcaatcgc > 2:304607‑M1/1‑7 (MQ=255) cATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCgg < 2:312567/149‑1 (MQ=255) aTCGCCctggcgcgctttcagctcaaggccatcgaagcgcgtggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtacagcgcattgatccagctggtattcgcccggctgcactggcaatcgct > 1:46125‑M1/1‑6 (MQ=255) tCGCCctggcgcgctttcagctcaaggccatcgaagcgcgtggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtacagcgcattgatccagctggtattcgcccggctgcactggcaatcgctg > 1:161319‑M1/1‑5 (MQ=255) cACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtaca > 7:61795‑M2/1‑37 (MQ=255) cACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtaca < 8:61795‑M2/98‑62 (MQ=255) | GGCTGACCTCGCTGGCGGGGAACCAGTTGGAAACCAGCAGCAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGAT > NC_002947/2923146‑2923437 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |