New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2923293	48 (0.890)	3 (0.060)	3/244	NT	6.5%	coding (1960/2772 nt)	PP_2563	antibiotic biosynthesis protein
	?	NC_002947	= 2923329	42 (0.830)					coding (1924/2772 nt)	PP_2563	antibiotic biosynthesis protein

CAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCATTACCCGCCACGCGCCTTTG  >  NC_002947/2923186‑2923474                                                                                                                                                |                                                                                                                                                  cagcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcga                                                                                                                                              >  1:161319‑M2/1‑144 (MQ=255)  agcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgat                                                                                                                                             >  1:46125‑M2/1‑143 (MQ=255)   gcGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatg                                                                                                                                            >  2:304607‑M2/1‑142 (MQ=255)          ccAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGgaga                                                                                                                                     <  7:175594/149‑1 (MQ=255)            aGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGAcc                                                                                                                                   <  4:199426/149‑1 (MQ=255)                           aTACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAg                                                                                                                    <  2:166659/149‑1 (MQ=255)                           aTACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAg                                                                                                                    >  2:56177/1‑149 (MQ=255)                               cAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGttt                                                                                                                >  7:19388/1‑149 (MQ=255)                                      aTCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGa                                                                                                          <  2:42253/148‑1 (MQ=255)                                        cAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGCACAGCACCGAGGTTTCGCCGAGTa                                                                                                       >  3:75262/1‑149 (MQ=255)                                          aTGCGCTGTACAACAGGGTTGGCACCACGATGGCAGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATc                                                                                                     >  1:225989/1‑149 (MQ=255)                                           tGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCg                                                                                                    <  2:225989/149‑1 (MQ=255)                                                     aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCgg                                                                                                   >  5:19196/1‑140 (MQ=255)                                                     aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCgg                                                                                                   <  6:19196/140‑1 (MQ=255)                                                     aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTc                                                                                          >  6:116407/1‑149 (MQ=255)                                                     aacaGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGAATCGCCACTCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTACGCCGAGTATCGGCCAGTggac                                                                                          >  1:14734/1‑147 (MQ=255)                                                        aGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGa                                                                                        >  6:18198/1‑148 (MQ=255)                                                               gCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCAcc                                                                                 <  7:132891/148‑1 (MQ=255)                                                                 accacGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAg                                                                              >  4:117190/1‑149 (MQ=255)                                                                   cacGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGt                                                                            >  2:268010/1‑149 (MQ=255)                                                                    acGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTg                                                                           >  2:92303/1‑149 (MQ=255)                                                                       aTGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGcc                                                                        <  5:116407/149‑1 (MQ=255)                                                                            tGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGAcc                                                                    >  1:312567/1‑148 (MQ=255)                                                                            tGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACca                                                                   >  2:316677/1‑149 (MQ=255)                                                                                 gTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATc                                                              <  5:18198/149‑1 (MQ=255)                                                                                     ccTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGga                                                          <  3:117190/149‑1 (MQ=255)                                                                                      cTGAGCAGCGTGGGTGTATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGTCCACAATCAGgat                                                         <  2:14734/149‑1 (MQ=255)                                                                                              cgtgcgtgCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGc                                                   >  2:252183/1‑147 (MQ=255)                                                                                              cgtgcgtgCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGa                                                 <  1:268010/149‑1 (MQ=255)                                                                                               gtgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtacagcgcattgatccagctggtattcgcccggctgcactgg                                                <  5:22317‑M2/149‑100 (MQ=255)                                                                                               gtgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAg                                                >  4:242622/1‑149 (MQ=255)                                                                                                tgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGACAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAg                                                >  2:268125/1‑148 (MQ=255)                                                                                                tgcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGACAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAg                                                >  2:272350/1‑148 (MQ=255)                                                                                                 gcgtgcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCa                                              >  2:221948/1‑149 (MQ=255)                                                                                                     gcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATCCg                                          >  5:10717/1‑149 (MQ=255)                                                                                                     gcATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACAAGGAACAGCACAGAGGTTTCGCCGAGTATCGGACAGTGGTCGAAATCAACCAGGTGGCAGACAACAATCAGGATGATGGCg                                                  >  1:246464/1‑141 (MQ=255)                                                                                                      cATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCgg                                         <  2:312567/149‑1 (MQ=255)                                                                                                            cACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtaca                                                                                      <  8:61795‑M2/98‑62 (MQ=255)                                                                                                            cACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGggcgatgcacgcacgctgctcaggccactgacagccatcgtggtgccaaccctgttgtaca                                                                                      >  7:61795‑M2/1‑37 (MQ=255)                                                                                                                           ccTTGAGCTGAAAGCGCGACAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCAtt                    <  1:272350/149‑1 (MQ=255)                                                                                                                           ccTTGAGCTGAAAGCGCGACAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCAtt                    <  1:268125/149‑1 (MQ=255)                                                                                                                               gAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCATTAccc                >  2:139644/1‑149 (MQ=255)                                                                                                                                aGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCa                                                             <  5:316300/103‑1 (MQ=255)                                                                                                                                aGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCa                                                             >  6:316300/1‑103 (MQ=255)                                                                                                                                   tGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCATTACCCGCCa            >  2:237280/1‑149 (MQ=255)                                                                                                                                     aaaGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCg                               >  7:155070/1‑128 (MQ=255)                                                                                                                                     aaaGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCg                               <  8:155070/128‑1 (MQ=255)                                                                                                                                          gcgcCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCg                               <  4:19439/123‑1 (MQ=255)                                                                                                                                            gcCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCATTACCCGCCACGCGCCttt   <  3:193882/149‑1 (MQ=255)                                                                                                                                             ccAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCATTACCCGCCACGCGCCTTTg  <  1:237280/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                  CAGCGATTGCCAGTGCAGCCGGGCGAATACCAGCTGGATCAATGCGCTGTACAACAGGGTTGGCACCACGATGGCTGTCAGTGGCCTGAGCAGCGTGCGTGCATCGCCACGCGCTTCGATGGCCTTGAGCTGAAAGCGCGCCAGGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTTCCATTACCCGCCACGCGCCTTTG  >  NC_002947/2923186‑2923474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.