New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2931543 =	60 (1.110)	3 (0.060)	3/244	NT	5.8%	coding (2559/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
	?	NC_002947	2931600 =	42 (0.830)					coding (2502/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein

GGGCTGTTGGCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCC  >  NC_002947/2931396‑2931691                                                                                                                                                       |                                                                                                                                                     gggCTGTTGGCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGAGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAAAAGGc                                                                                                                                                     >  5:20885/1‑149 (MQ=255)   aagacgccgtcccacacacccacccactgcacaaaccctcgcccggcagtttcccgggctgccggacagcgcgcttgaagagttgcttgccaacatcagcaacgccgaacgggaacgtctgacaaacggacgagtgccgcttcgcattg                                                                                                                                                      >  5:141439‑M1/149‑149 (MQ=255)       ttGGCCAAGCAGTGATGCGCAGTGCTGGCGATCACCTAGGGCTAGTTGCAGCAACCGGGCCGGTTCAGCCTGGGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCgagg                                                                                                                                                <  3:159202/148‑1 (MQ=255)       ttGGCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCgagga                                                                                                                                               <  3:216848/149‑1 (MQ=255)       ttGGCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCgag                                                                                                                                                 >  4:288754/1‑147 (MQ=255)       ttGGCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCgag                                                                                                                                                 >  2:107693/1‑147 (MQ=255)       cgccgtcccacacacccacccactgcacaaaccctcgcccggcagtttcccgggctgccggacagcgcgcttgaagagttgcttgccaacatcagcaacgccgaacgggaacgtctgacaaacggacgagtgccgcttcgcattGCCga                                                                                                                                                  >  3:127378‑M1/145‑149 (MQ=255)        gccgtcccacacacccacccactgcacaaaccctcgcccggcagtttcccgggctgccggacagcgcgcttgaagagttgcttgccaacatcagcaacgccgaacgggaacgtctgacaaacggacgagtgccgcttcgcattGCCgag                                                                                                                                                 >  1:15152‑M1/144‑149 (MQ=255)         ggCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCgaggag                                                                                                                                              <  4:328289/148‑1 (MQ=255)         ggCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGaggagg                                                                                                                                             >  1:147452/1‑149 (MQ=255)          gCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAggg                                                                                                                                            >  4:40217/1‑149 (MQ=255)          gCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAggg                                                                                                                                            >  4:178586/1‑149 (MQ=255)            cAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCa                                                                                                                                          >  8:249549/1‑149 (MQ=255)                   tGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCaa                                                                                                                                   <  2:58072/149‑1 (MQ=255)                       gcgcAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCcg                                                                                                                               >  1:125161/1‑149 (MQ=255)                           aGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCt                                                                                                                           >  1:236903/1‑149 (MQ=255)                             tGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCg                                                                                                                         <  3:178586/149‑1 (MQ=255)                              gCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGa                                                                                                                        <  3:288754/149‑1 (MQ=255)                                    gATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGc                                                                                                                  <  2:125161/149‑1 (MQ=255)                                     aTCACCTTTGGCGTTTTGCATCAACCGGGGCGGTTCAGGCTGCGGGTGCGGGGCCTGCATCGCCTGCTTGATTCGTTGTCTGCTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCtt                                                                                                                    <  1:107693/149‑1 (MQ=255)                                          cTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAgg                                                                                                            >  5:60774/1‑149 (MQ=255)                                             gggCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGt                                                                                                         >  2:241276/1‑149 (MQ=255)                                                      gcagcaACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTc                                                                                                 <  8:171226/148‑1 (MQ=255)                                                          gggctgccggacagcgcgcttgaagagttgcttgccaacatcagcaacgccgaacgggaacgtctgacaaacggacgagtgccgcttcgcattGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCgg                                                                                               >  8:251627‑M1/94‑149 (MQ=255)                                                             ccGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCaa                                                                                                                                   >  3:100965/1‑107 (MQ=255)                                                             ccGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCaa                                                                                                                                   <  4:100965/107‑1 (MQ=255)                                                               gggCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGt                                                                                                         <  8:205376/131‑1 (MQ=255)                                                               gggCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGt                                                                                                         >  7:205376/1‑131 (MQ=255)                                                               gggCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCg                                                                                        >  2:236595/1‑148 (MQ=255)                                                               gggCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCg                                                                                        >  4:152599/1‑148 (MQ=255)                                                                    ggTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCgg                                                                                  <  2:236903/149‑1 (MQ=255)                                                                    ggTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCgg                                                                                  <  2:147452/149‑1 (MQ=255)                                                                     gTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCgg                                                                                  >  4:17866/1‑148 (MQ=255)                                                                       tCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCAc                                                                               >  2:18807/1‑149 (MQ=255)                                                                        cAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGTGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCAc                                                                               <  1:248368/148‑1 (MQ=255)                                                                           ccagCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGt                                                                           >  6:195067/4‑149 (MQ=255)                                                                           ccTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGt                                                                           >  1:178171/1‑149 (MQ=255)                                                                                 ggTGCGCGGCTTGCAGCGCATTCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACATGCCGAGGTGTGCACTATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCTAAGCGGCACTCGTCCGttt                                                                     <  6:20885/149‑1 (MQ=255)                                                                                  gTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAg                                                                                     <  5:225833/132‑1 (MQ=255)                                                                                  gTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAg                                                                                     >  6:225833/1‑132 (MQ=255)                                                                                   agttgcttgccaacatcagcaacgccgaacgggaacgtctgacaaacggacgagtgccgcttcgcattGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCaa                                                                                            <  4:97955‑M1/59‑1 (MQ=255)                                                                                   agttgcttgccaacatcagcaacgccgaacgggaacgtctgacaaacggacgagtgccgcttcgcattGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCaa                                                                                            >  3:97955‑M1/69‑127 (MQ=255)                                                                                     cgcgGCTTGCAGCGCCTGCGTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCa                                                                 <  6:60774/149‑1 (MQ=255)                                                                                      gcgGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGt                                                                   >  7:14248/1‑146 (MQ=255)                                                                                      gcgGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAg                                                                <  3:40217/149‑1 (MQ=255)                                                                                        ggCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGAc                                                              >  6:53890/1‑149 (MQ=255)                                                                                                   ccTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCg                                                   >  1:49063/1‑149 (MQ=255)                                                                                                   ccTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCg                                                   <  1:18807/149‑1 (MQ=255)                                                                                                          gATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTg                                             <  3:17866/148‑1 (MQ=255)                                                                                                             gCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCCTTCGGCGTTGCTGa                                         >  1:254642/1‑149 (MQ=255)                                                                                                              cGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTGAGACGTTCCCGTTCGGCGTTGCTGAt                                        <  8:14248/149‑1 (MQ=255)                                                                                                              cGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGAt                                        <  3:152599/149‑1 (MQ=255)                                                                                                              cGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGAt                                        <  1:236595/149‑1 (MQ=255)                                                                                                              cGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGAt                                        <  5:53890/149‑1 (MQ=255)                                                                                                               gTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGt                                                                   >  6:201094/1‑121 (MQ=255)                                                                                                               gTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGt                                                                   <  5:201094/121‑1 (MQ=255)                                                                                                               gTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATg                                       >  1:189720/1‑149 (MQ=255)                                                                                                                tAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGt                                      >  4:134685/1‑149 (MQ=255)                                                                                                                  g‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGtt                                     <  7:249549/148‑1 (MQ=255)                                                                                                                      aCTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTgg                                   <  1:241276/149‑1 (MQ=255)                                                                                                                             tcgtTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGgcaag                               >  7:138142/1‑146 (MQ=255)                                                                                                                             tcgtTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGgcaag                               <  8:138142/146‑1 (MQ=255)                                                                                                                                   gCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCtt                       >  6:34378/1‑148 (MQ=255)                                                                                                                                   gCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTc                      <  2:49063/149‑1 (MQ=255)                                                                                                                                   gCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGAAActctgc                      >  4:59369/1‑147 (MQ=255)                                                                                                                                              ccTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTg                                             >  2:140657/1‑115 (MQ=255)                                                                                                                                                tGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTcc         >  8:115360/1‑149 (MQ=255)                                                                                                                                                       GCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGcc  <  4:184276‑M1/149‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                     GGGCTGTTGGCCAAGCAGTGAGGCGCAGTGCTGGCGATCACCTAGGGCGAGTTGCAGCAACCGGGCCGGTTCAGCCTGCGGGTGCGCGGCTTGCAGCGCCTGCTTGATGCGTAG‑‑‑ACTGTCGTCGTTGGCCAGGCTGGGCCTGAACAGGCCGAGGAGGGCACGATCAAGCCGCGCTCGAGCTTGCAGAAGGCGTGCTTCCTCGGCAATGCGAAGCGGCACTCGTCCGTTTGTCAGACGTTCCCGTTCGGCGTTGCTGATGTTGGCAAGCAACTCTTCAAGCGCGCTGTCCGGCAGCC  >  NC_002947/2931396‑2931691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.