New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3011368 =43 (0.800)4 (0.080) 3/246 NT 9.3% coding (429/1614 nt) bcsG endoglucanase
?NC_002947 3011486 = 37 (0.720)coding (547/1614 nt) bcsG endoglucanase

GACTTCTCGTGGGACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGC  >  NC_002947/3011222‑3011515
                                                                                                                                                  |                                                                                                                                                   
gACTTCTCGTGGGACTATCTGCGCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGGTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCGGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCt                                                                                                                                                   >  7:52028/1‑149 (MQ=255)
  gtcccgcagccccacggcggacaggtcatcccaggccagcgagcagatgttgattaccagcaggtcgaacggttgctcatcggcactcacggcagggaacgccgtcacccgctcgcgctcactggcgaagaagcgctcaagccaGCTgt                                                                                                                                                 <  3:71600‑M1/5‑1 (MQ=255)
    cccgcagccccacggcggacaggtcatcccaggccagcgagcagatgttgattaccagcaggtcgaacggttgctcatcggcactcacggcagggaacgccgtcacccgctcgcgctcactggcgaagaagcgctcaagccaGCTgtc                                                                                                                                                <  5:310343‑M1/6‑1 (MQ=255)
     ctcGTGGGACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTgtcgg                                                                                                                                              >  1:23979/1‑149 (MQ=255)
        gTGGGACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTgtcg                                                                                                                                               <  4:108755/145‑1 (MQ=255)
        gTGGGACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTgtcg                                                                                                                                               >  3:108755/1‑145 (MQ=255)
           ggACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGACGGTcggcg                                                                                                                                        <  2:128001/149‑1 (MQ=255)
            gACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATgg                                                                                                                                                     <  3:310387/135‑1 (MQ=255)
             aCTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCggcggc                                                                                                                                      >  1:223779/1‑149 (MQ=255)
                     cTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGcc                                                                                                                                 <  8:92600/146‑1 (MQ=255)
                        gAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTgt                                                                                                                                                 <  6:92885/127‑1 (MQ=255)
                        gAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTgt                                                                                                                                                 >  5:92885/1‑127 (MQ=255)
                          gtcatcccaggccagcgagcagatgttgattaccagcaggtcgaacggttgcacatcggcgctcacggcacggaacgccgtcaccccctcgcgctcactggcgatgaagcgctccagccag                                                                                                                                                     <  6:246840‑M1/1‑1 (MQ=255)
                          gctgctGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTgg                                                                                                                         >  8:98691/1‑149 (MQ=255)
                             atcccaggccagcgagcagatgttgattaccagcaggtcgaacggttgctcatcggcactcacggcagggaacgccgtcacccgctcgcgctcactggcgaagaagcgctcaagccaGCt                                                                                                                                                   >  8:323948‑M1/118‑120 (MQ=255)
                             atcccaggccagcgagcagatgttgattaccagcaggtcgaacggttgctcatcggcactcacggcagggaacgccgtcacccgctcgcgctcactggcgaagaagcgctcaagccaGCt                                                                                                                                                   <  7:323948‑M1/3‑1 (MQ=255)
                                 ggCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGcagg                                                                                                                  >  3:47361/1‑149 (MQ=255)
                                   ccGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGcaggcc                                                                                                                >  2:232341/1‑149 (MQ=255)
                                         catcaACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGGTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGcaggccaggc                                                                                                            <  7:284994/147‑1 (MQ=255)
                                          atcaACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGcc                                                                                                         <  2:223779/149‑1 (MQ=255)
                                           tcaACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGccc                                                                                                        >  2:48535/1‑149 (MQ=255)
                                              agatgttgattaccagcaggtcgaacggttgctcatcggcactcacggcagggaacgccgtcacccgctcgcgctcactggcgaagaagcgctcaagccaGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGc                                                                                                     <  3:303098‑M1/49‑1 (MQ=255)
                                               cTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCg                                                                                                    >  7:268178/1‑149 (MQ=255)
                                                  gAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGt                                                                                                   <  5:323575/147‑1 (MQ=255)
                                                  gAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGt                                                                                                   >  6:323575/1‑147 (MQ=255)
                                                  gAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGt                                                                                                   <  2:23979/147‑1 (MQ=255)
                                                  gAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTgg                                                                                                 >  6:86503/1‑149 (MQ=255)
                                                              ggCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCg                                                                                     <  1:232341/149‑1 (MQ=255)
                                                               gcgcTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTggcg                                                                                               <  1:37942/138‑1 (MQ=255)
                                                               gcgcTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTggcg                                                                                               >  2:37942/1‑138 (MQ=255)
                                                                 gcTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAg                                                                                  >  1:112845/1‑149 (MQ=255)
                                                                     gCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCg                                                                               >  6:307580/1‑148 (MQ=255)
                                                                       cggttgctcatcggcactcacggcagggaacgccgtcacccgctcgcgctcactggcgaagaagcgctcaagccaGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAAc                                                                            <  5:208741‑M1/74‑1 (MQ=255)
                                                                                 gtggGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGc                                                                  >  7:238781/1‑149 (MQ=255)
                                                                                     gTTACCTGTACCTAAGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTCGTTGCAGGCCAGGCGCCCGGCGTGCCGGCGCGTACCGCAGCCGAACCCGCGCCTCCCACt                                                              >  2:189957/1‑149 (MQ=255)
                                                                                      ttACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTg                                                             <  8:52028/149‑1 (MQ=255)
                                                                                          cTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTgcag                                                          >  3:94686/1‑148 (MQ=255)
                                                                                          cTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTgcag                                                          >  6:22624/1‑148 (MQ=255)
                                                                                             tACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCTCGTACCGCAGCCGAACCCGCGCCTGCCACTGCagcagc                                                      <  2:112845/149‑1 (MQ=255)
                                                                                                cTAGGCCATTGGCTGCGCCTGATCACCCTGTGCCTGCTGGGGGTGGCATGGCTGTCGGTCGGCGGGTTGCCGTCGCTGGTTGCAGGGCAGGCGccc                                                                                                        <  4:119088/96‑1 (MQ=255)
                                                                                                cTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGccc                                                                                                        >  3:119088/1‑96 (MQ=255)
                                                                                                               cgcCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGa                                    <  8:268178/149‑1 (MQ=255)
                                                                                                                 ccTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACa                                  >  2:172176/1‑149 (MQ=255)
                                                                                                                   tGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGc                                >  2:215232/1‑149 (MQ=255)
                                                                                                                   tGAGCACCCAGAGCCTGCAGGGGTTGGCATGGCTGTCGGTAGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCCGCCTGGCCGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGc                                >  4:17311/1‑149 (MQ=255)
                                                                                                                    gcgctcactggcgaagaagcgctcaagccaGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAg                                 >  4:303098‑M1/31‑147 (MQ=255)
                                                                                                                    gcgctcactggcgaagaagcgctcaagccaGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAg                                 >  6:208741‑M1/31‑147 (MQ=255)
                                                                                                                      gCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTg                              <  8:238781/148‑1 (MQ=255)
                                                                                                                       cACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTgg                             <  4:47361/148‑1 (MQ=255)
                                                                                                                         cccTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCtt                          <  5:307580/149‑1 (MQ=255)
                                                                                                                         cccTGAGCCTCCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCtt                          <  7:209959/149‑1 (MQ=255)
                                                                                                                           cTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGa                        <  8:143193/149‑1 (MQ=255)
                                                                                                                              aGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAg                       <  1:48535/147‑1 (MQ=255)
                                                                                                                                         gTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGa                                                   <  7:252517/108‑1 (MQ=255)
                                                                                                                                         gTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGa                                                   >  8:252517/1‑108 (MQ=255)
                                                                                                                                         gTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCa          <  7:98691/149‑1 (MQ=255)
                                                                                                                                             gCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTc                                      <  2:234542/117‑1 (MQ=255)
                                                                                                                                             gCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGt        >  3:89077/1‑147 (MQ=255)
                                                                                                                                                  GCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAgcgc  >  5:86503‑M1/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
GACTTCTCGTGGGACTATCTGCTCGAGCTGCTGGGCCGCTTCATCAACTGGAACCTGCTGGGGGCGCTGGCAATGTTGCTGGTGGGTTACCTGTACCTACGCCATTGGCTGCGCCTGAGCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGC  >  NC_002947/3011222‑3011515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.