New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3011368 =	43 (0.800)	4 (0.080)	3/246	NT	9.3%	coding (429/1614 nt)	bcsG	endoglucanase
	?	NC_002947	3011486 =	37 (0.720)					coding (547/1614 nt)	bcsG	endoglucanase

GCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGATGACCTGTCCGCCGTGGGGCTGCGGGAC  >  NC_002947/3011340‑3011629                                                                                                                                                   |                                                                                                                                                gCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTg                                                                                                                                                <  8:238781/148‑1 (MQ=255)  cACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTgg                                                                                                                                               <  4:47361/148‑1 (MQ=255)    cccTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCtt                                                                                                                                            <  5:307580/149‑1 (MQ=255)    cccTGAGCCTCCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCtt                                                                                                                                            <  7:209959/149‑1 (MQ=255)      cTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGa                                                                                                                                          <  8:143193/149‑1 (MQ=255)         aGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAg                                                                                                                                         <  1:48535/147‑1 (MQ=255)                    gTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCa                                                                                                                            <  7:98691/149‑1 (MQ=255)                        gCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGt                                                                                                                          >  3:89077/1‑147 (MQ=255)                             GCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAgcgc                                                                                                                    >  5:86503‑M1/1‑148 (MQ=255)                              ctgtcgagcgtggcattgtcggctgctgcagtggcaggcgcgggttcggctgcggtacgcgccgccacgccgggcgcctggcctgcaaccagcgacggcaagccgccgaccgacagcTGGCTTGAGCGCTTCTTCGCCAGTGAgcgc                                                                                                                    >  4:303098‑M2/118‑147 (MQ=255)                              ctgtcgagcgtggcattgtcggctgctgcagtggcaggcgcgggttcggctgcggtacgcgccgccacgccgggcgcctggcctgcaaccagcgacggcaagccgccgaccgacagcTGGCTTGAGCGCTTCTTCGCCAGTGAgcgc                                                                                                                    >  6:208741‑M2/118‑147 (MQ=255)                              CTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAgcgc                                                                                                                    <  5:194004‑M1/147‑1 (MQ=255)                                   GGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCggg                                                                                                             <  2:283236‑M1/149‑1 (MQ=255)                                                     gCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGcc                                                                                            <  4:94686/148‑1 (MQ=255)                                                      cTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGt                                                                                          >  2:337743/1‑149 (MQ=255)                                                      cTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGt                                                                                          >  2:157669/1‑149 (MQ=255)                                                         gTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGa                                                                                        <  1:215232/148‑1 (MQ=255)                                                            gCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAgc                                                                                                                      >  3:306819/1‑115 (MQ=255)                                                            gCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAgc                                                                                                                      <  4:306819/115‑1 (MQ=255)                                                              aggccaggcGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTcc                                                                                                 >  5:259512/1‑134 (MQ=255)                                                              aggccaggcGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTcc                                                                                                 <  6:259512/134‑1 (MQ=255)                                                                gccaggcGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGAt                                                                                <  1:337743/149‑1 (MQ=255)                                                                gccaggcGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGAt                                                                                <  5:22624/149‑1 (MQ=255)                                                                gccaggcGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGAt                                                                                <  1:157669/149‑1 (MQ=255)                                                                  caggcGCGCGGGGTTGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGTCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTACCTGCCGTGAGTGCCTATGa                                                                              <  1:189957/149‑1 (MQ=255)                                                                  caggcGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGa                                                                              <  1:172176/149‑1 (MQ=255)                                                                         gttcggctgcggtacgcgccgccacgccgggcgcctggcctgcaaccagcgacggcaagccgccgaccgacagcTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCg                                                                       <  5:208741‑M2/75‑1 (MQ=255)                                                                             cGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCg                                                                   <  6:194004/149‑1 (MQ=255)                                                                                 gcggcgCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACct                                                               >  3:36070/1‑149 (MQ=255)                                                                                  cggcgCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctg                                                              >  2:198267/1‑149 (MQ=255)                                                                                     cgcgTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctgctg                                                           <  4:89077/149‑1 (MQ=255)                                                                                     cgcgTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctgctg                                                           <  3:17311/149‑1 (MQ=255)                                                                                      gcgTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTgg                                                          <  4:36070/149‑1 (MQ=255)                                                                                          aCCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctgc                                                             <  6:308038/142‑1 (MQ=255)                                                                                          aCCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctgc                                                             >  5:308038/1‑142 (MQ=255)                                                                                            cGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGa                                                                              <  7:143225/123‑1 (MQ=255)                                                                                            cGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGa                                                                              >  8:143225/1‑123 (MQ=255)                                                                                                gCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACAt                                                <  1:283236/149‑1 (MQ=255)                                                                                                 ccGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATc                                               >  2:187855/1‑149 (MQ=255)                                                                                                  gccgggcgcctggcctgcaaccagcgacggcaagccgccgaccgacagcTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCt                                              <  3:303098‑M2/100‑1 (MQ=255)                                                                                                       ccGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCg                                         >  8:185962/1‑149 (MQ=255)                                                                                                        cgcgCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGc                                        >  6:310343/1‑149 (MQ=255)                                                                                                         gcgcCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctgctg                                                           >  8:65159/1‑129 (MQ=255)                                                                                                         gcgcCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACctgctg                                                           <  7:65159/129‑1 (MQ=255)                                                                                                                                   tGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGATGACCTGTCCGCCGTgg             <  2:131524/149‑1 (MQ=255)                                                                                                                                      cACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCTACATCTGCTCGCTGGCCTGGGATGACCTGTCCGCCGTGGGGc          >  4:71600/1‑149 (MQ=255)                                                                                                                                             gacagcTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGATGACCTGTCCGCCGTGGGGCTGCggg    <  5:310343‑M2/142‑1 (MQ=255)                                                                                                                                              acagcTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGATGACCTGTCCGCCGTGGGGCTGCGGGAc  <  3:71600‑M2/144‑1 (MQ=255)                                                                                                                                                agcTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGAt                             <  7:323948‑M2/117‑1 (MQ=255)                                                                                                                                                agcTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGAt                             >  8:323948‑M2/4‑120 (MQ=255)                                                                                                                                                  cTGGCTGGAGCGCTTCATCGCCAGTGAGCGCGAGGGGGTGACGGCGTTCCGTGCCGTGAGCGCCGATGTGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGATGAc                          <  6:246840‑M2/120‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                GCACCCTGAGCCTGCTGGGGTTGGCATGGCTGTCGGTCGGCGGCTTGCCGTCGCTGGTTGCAGGCCAGGCGCCCGGCGTGGCGGCGCGTACCGCAGCCGAACCCGCGCCTGCCACTGCAGCAGCCGACAATGCCACGCTCGACAGCTGGCTTGAGCGCTTCTTCGCCAGTGAGCGCGAGCGGGTGACGGCGTTCCCTGCCGTGAGTGCCGATGAGCAACCGTTCGACCTGCTGGTAATCAACATCTGCTCGCTGGCCTGGGATGACCTGTCCGCCGTGGGGCTGCGGGAC  >  NC_002947/3011340‑3011629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.