New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 358294443 (0.800)4 (0.080) 4/248 NT 9.4% coding (1015/1359 nt) benA benzoate 1,2‑dioxygenase subunit alpha
?NC_002947 = 3582963 36 (0.700)coding (1034/1359 nt) benA benzoate 1,2‑dioxygenase subunit alpha

GCCAGGCACGTGCCGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATGGCGGCGGCACTGGCTGGAA  >  NC_002947/3582798‑3583089
                                                                                                                                                   |                                                                                                                                                 
gCCAGGCACGTGCCGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATcgcg                                                                                                                                                 >  5:309078/1‑149 (MQ=255)
 ccAGTCAGGTGCCGACTGGATGATCGTAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGGTGCCCGGCAGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCgcgc                                                                                                                                                <  3:61269/149‑1 (MQ=255)
 ccAGGCACGTGCCGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCgcgc                                                                                                                                                <  3:298603/149‑1 (MQ=255)
      cACGTGCCGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGTGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGaaa                                                                                                                                           <  7:195320/149‑1 (MQ=255)
            ccGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAgg                                                                                                                                         >  5:8337/1‑145 (MQ=255)
            ccGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAgg                                                                                                                                         <  6:8337/145‑1 (MQ=255)
                        tCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCcg                                                                                                                              <  5:43767‑M2/144‑3 (MQ=255)
                        tCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCcg                                                                                                                              >  6:43767‑M2/1‑142 (MQ=255)
                           aaaaCTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGt                                                                                                                      <  5:104605/149‑1 (MQ=255)
                             tccTCGCGCCACCTTTGCCTGGACCCCAACGTGGACCTGATGGACCAGTTCCGCTCGCAGATCCGCGTTGCCCGTCCGATTGCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGt                                                                                                                      <  8:252364/145‑1 (MQ=255)
                              aCTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGc                                                                                                                    >  4:151087/1‑148 (MQ=255)
                               cTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGTCGAGAGGGACGATGCTCGt                                                                                                                      >  7:252364/1‑145 (MQ=255)
                                  gcgcAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGc                                                                                                               <  6:309078/149‑1 (MQ=255)
                                                tGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCgaga                                                                                                                                    >  8:161740/1‑114 (MQ=255)
                                                tGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCgaga                                                                                                                                    <  7:161740/114‑1 (MQ=255)
                                                tGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCcga                                                                                                                             <  5:156395‑M2/121‑4 (MQ=255)
                                                tGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCcga                                                                                                                             >  6:156395‑M2/1‑118 (MQ=255)
                                                     cccAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACTAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGa                                                                                            >  8:311866/1‑149 (MQ=255)
                                                     cccAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGgcgctctcgcctttcggcgcgatgca                                                                                                                         >  5:158243‑M1/1‑94 (MQ=255)
                                                     cccAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGgcgctctcgcctttcggcgcgatgca                                                                                                                         <  6:158243‑M1/120‑27 (MQ=255)
                                                              tACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCaa                                                                                   <  1:328430/149‑1 (MQ=255)
                                                                  tGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGt                                                                                >  6:160229/1‑148 (MQ=255)
                                                                            gTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATgg                                                                     >  4:194204/1‑149 (MQ=255)
                                                                                  cTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGgcgctctcgcctttcggcgcgatgcagtagatg                                                                                                                  >  4:232398‑M1/1‑65 (MQ=255)
                                                                                  cTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGgcgctctcgcctttcggcgcgatgcagtagatg                                                                                                                  <  3:232398‑M1/98‑34 (MQ=255)
                                                                                   tCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGCCCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACGTCTTCAACGTCAGCGGCATGGCcccccc                                                              >  6:284728/1‑149 (MQ=255)
                                                                                   tCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAgcgc                                                                                                                                <  4:323728/83‑1 (MQ=255)
                                                                                   tCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAgcgc                                                                                                                                >  3:323728/1‑83 (MQ=255)
                                                                                     gCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGcc                                                                                                                   <  4:166832/94‑1 (MQ=255)
                                                                                     gCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGcc                                                                                                                   >  3:166832/1‑94 (MQ=255)
                                                                                     gCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCgg                                                            >  5:200285/1‑149 (MQ=255)
                                                                                     gCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCg                                                             >  5:182837/1‑148 (MQ=255)
                                                                                      cAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGga                                                           >  1:345094/1‑149 (MQ=255)
                                                                                       agctCCGCGTTGCCCGGCCGATTTCGGTGAACAAGTCCGAAATCACCATGTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGgac                                                          <  8:260753/146‑1 (MQ=255)
                                                                                       aGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGgac                                                          <  3:151087/149‑1 (MQ=255)
                                                                                                   cccGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGgaagaa                                              >  3:210874/1‑149 (MQ=255)
                                                                                                     cGGCTGATTTCGGTGAACAAGACCGAAGATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAAt                                             >  1:15268/1‑149 (MQ=255)
                                                                                                       gCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTcc                                          <  2:305832/149‑1 (MQ=255)
                                                                                                                ggTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGc                                  <  2:345094/148‑1 (MQ=255)
                                                                                                                ggTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCAGCTCGTGc                                  >  3:296022/1‑148 (MQ=255)
                                                                                                                  tGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGc                                  >  7:28608/1‑146 (MQ=255)
                                                                                                                   gAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGa                              >  2:275443/1‑149 (MQ=255)
                                                                                                                         gACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCa                                                                                    <  6:40543/89‑1 (MQ=255)
                                                                                                                         gACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGc                         >  8:81814/1‑148 (MQ=255)
                                                                                                                         gACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGc                         >  6:140427/1‑148 (MQ=255)
                                                                                                                          aCCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTa                       >  5:237228/1‑149 (MQ=255)
                                                                                                                            cGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTg                                                    <  6:236697/118‑1 (MQ=255)
                                                                                                                            cGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTg                                                    >  5:236697/1‑118 (MQ=255)
                                                                                                                            cGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACACCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATg                     >  8:209532/1‑149 (MQ=255)
                                                                                                                                   cACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATggcggcg               >  3:188919/1‑149 (MQ=255)
                                                                                                                                    aCCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATggcggcgg              <  4:296022/149‑1 (MQ=255)
                                                                                                                                     ccATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATggcggcggc             <  3:194204/149‑1 (MQ=255)
                                                                                                                                      cATCTACTGCATCGCGCCGAAAGGCGAGAGCGCcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgag                                                               >  4:232398‑M2/1‑33 (MQ=255)
                                                                                                                                      cATCTACTGCATCGCGCCGAAAGGCGAGAGCGCcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgag                                                               <  3:232398‑M2/98‑66 (MQ=255)
                                                                                                                                      cATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATGGCGGCGGCa            <  4:188919/149‑1 (MQ=255)
                                                                                                                                           aCTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATGGCGGCGGCActggc       >  1:331073/1‑149 (MQ=255)
                                                                                                                                             tGCATCGCGCCGAAAGGCGAGAGCGCcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgagctgaactggtccatcaggtacacgttggg                                  >  5:158243‑M2/1‑26 (MQ=255)
                                                                                                                                             tGCATCGCGCCGAAAGGCGAGAGCGCcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgagctgaactggtccatcaggtacacgttggg                                  <  6:158243‑M2/120‑95 (MQ=255)
                                                                                                                                                aTCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATGGCGGCGGCACTGGCTGGaa  <  5:140427/149‑1 (MQ=255)
                                                                                                                                                 tCGgcgctctcgcctttcggcgcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgagctgaactggtccatcaggtacacgttggggtaca                             <  5:156395‑M1/121‑119 (MQ=255)
                                                                                                                                                 tCGgcgctctcgcctttcggcgcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgagctgaactggtccatcaggtacacgttggggtaca                             >  6:156395‑M1/1‑3 (MQ=255)
                                                                                                                                                  cGgcgctctcgcctttcggcgcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgagctgaactggtccatcaggtacacgttggggtacaggcacaggttgcgcgagttttcga     >  6:43767‑M1/1‑2 (MQ=255)
                                                                                                                                                  cGgcgctctcgcctttcggcgcgatgcagtagatggtgatttcggtcttgttcaccgaaatcggccgggcaacgcggatctgcgagctgaactggtccatcaggtacacgttggggtacaggcacaggttgcgcgagttttcga     <  5:43767‑M1/144‑143 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
GCCAGGCACGTGCCGACTGGATGATCGAAAACTCGCGCAACCTGTGCCTGTACCCCAACGTGTACCTGATGGACCAGTTCAGCTCGCAGATCCGCGTTGCCCGGCCGATTTCGGTGAACAAGACCGAAATCACCATCTACTGCATCGCGCCGAAAGGCGAGAGCGCCGATGCTCGTGCCAAGCGTATTCGCCAGTACGAAGACTTCTTCAACGTCAGCGGCATGGCCACCCCGGACGACCTGGAAGAATTCCGCTCGTGCCAGACCGGCTATGGCGGCGGCACTGGCTGGAA  >  NC_002947/3582798‑3583089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.