| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3590864 = | 41 (0.760) | 4 (0.080) | 3/244 | NT | 10.2% | coding (60/1080 nt) | PP_3169 | membrane protein |
| ? | NC_002947 | 3590926 = | 32 (0.630) | coding (122/1080 nt) | PP_3169 | membrane protein | |||||
CAGCTGTTCTGAGCCATCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTTCTCCCACTCGTTGTTCGTGCTCACCGGCCTG > NC_002947/3590719‑3591008 | ctgggcaaggtataccccttgccgggccagcgcctgttgaccagccaggccaacagcaaggccaggccggtgagcacgaacaacgagtgggagaagccgcgatgataagtcatctgcgacaccgggtcggcatagcgaatgatcaCATc < 1:307209‑M1/4‑1 (MQ=255) cTGTTCTGAGCCATCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAg > 5:50690/1‑149 (MQ=255) cTGAGCCATCCCGGAGACTTGCCCAGCGGGGGGGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGcc < 6:134051/148‑1 (MQ=255) tGAGCCATCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGa > 3:135573/1‑149 (MQ=255) ccATCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGAcgct > 4:6420/1‑149 (MQ=255) cATCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGAcgctc < 8:230248/149‑1 (MQ=255) aTCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGAcgctcg > 6:197210/1‑149 (MQ=255) aGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCgctgc > 4:107115/1‑149 (MQ=255) aGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCgctgc > 8:232464/1‑149 (MQ=255) ggAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCgctgct > 4:128183/1‑149 (MQ=255) ggACAATGGCGCATGGGGGGTGTATGGGGGTAGCGTGCGGAACCGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCgctgct < 8:237119/149‑1 (MQ=255) ttGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATgg > 3:66384/1‑149 (MQ=255) gcgcATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTg < 3:128183/149‑1 (MQ=255) cgcATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTg < 5:197210/148‑1 (MQ=255) cATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTgcag > 4:187793/1‑149 (MQ=255) gggTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCg > 5:352649/1‑120 (MQ=255) gggTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCg < 6:352649/120‑1 (MQ=255) gaccagccaggccaacagcaaggccaggccggtgagcacgaacaacgagtgggagaagccgcgatgataagtcatctgcgacaccgggtcggcatagcgaatgatcaCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTggg < 2:177715‑M1/42‑1 (MQ=255) gggTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGcc < 3:304113/149‑1 (MQ=255) gcaaggccaggccggtgagcacgaacaacgagtgggagaagccgcgatgataagtcatctgcgacaccgggtcggcatagcgaatgatcaCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTgg > 1:177715‑M1/91‑149 (MQ=255) cGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGa < 4:66384/148‑1 (MQ=255) ggccaggccggtgagcacgaacaacgagtgggagaagccgcgatgataagtcatctgcgacaccgggtcggcatagcgaatgatcaCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGAtgt > 2:307209‑M1/87‑149 (MQ=255) gAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGAtg < 2:183809/148‑1 (MQ=255) gAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGAtg > 1:183809/1‑148 (MQ=255) gcgaggccggtgagcacgaacaacgagtgggagtagccgcgatgataagtcatctgcgacaccgggtcggcatagcgaatgatcaCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGAtgt > 7:211736‑M1/86‑148 (MQ=255) aaaCGACTCTTTCAGGAATCCCCACCTTGGTCTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGAt > 1:28047/1‑146 (MQ=255) aaaCGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGAt < 2:28047/146‑1 (MQ=255) ctctTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCAtt < 3:6420/149‑1 (MQ=255) tttCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTc < 3:187793/147‑1 (MQ=255) aGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTAt < 4:135573/148‑1 (MQ=255) aGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATg > 4:149770/1‑149 (MQ=255) ccACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGcc > 8:285486/1‑115 (MQ=255) ccACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGcc < 7:285486/115‑1 (MQ=255) gACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTgg > 4:219267/1‑115 (MQ=255) gACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTgg < 3:219267/115‑1 (MQ=255) tCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGAt > 6:156722/1‑149 (MQ=255) aTCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCg < 4:155414/135‑1 (MQ=255) aTCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCg > 3:155414/1‑135 (MQ=255) gTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCgg < 7:232464/149‑1 (MQ=255) ttGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGTTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGa < 5:73170/129‑1 (MQ=255) ttGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGTTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGa > 6:73170/1‑129 (MQ=255) gcgcggcgcTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTtctc < 3:107115/148‑1 (MQ=255) ggagcTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACTCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACATATCAACGCGGCTTCTCCCAc > 4:208146/4‑148 (MQ=255) cAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTTCTCCCACTCgttgtt > 3:144371/1‑149 (MQ=255) atgggACCGTGCTCGGGGGCATCCTGGGCCGACGCTCGCTGCTGTTTGGTGCATCAGTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGTCTTCTCCCACTCGTTGTTc < 3:208146/147‑1 (MQ=255) cGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTTCTCCCACTCGTTGTTCGTGCTCa > 2:268577/1‑149 (MQ=255) gggCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTTCTCCCACTCGTTGTTCGTGCTCACCggc < 3:149770/147‑1 (MQ=255) ggCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTTCTCCCACTCGTTGTTCGTGCTCACCggcctg > 2:267715/1‑149 (MQ=255) | CAGCTGTTCTGAGCCATCCAGGAGAATTGCGCATCGGGGGTGTATGGGGGTAGCGTGCGGAAACGACTCTTTCAGGAATCCCCACCTTGGACTCCATCACCCAAGCCGTACTTGGCGCGGCGCTGCAAGGGACCGTGCTCGGGCGCATCCAGGGCCGACGCTCGCTGCTGTATGGTGCAGCACTGGGCACGCTGCCGGACCTGGATGTGATCATTCGCTATGCCGACCCGGTGTCGCAGATGACTTATCATCGCGGCTTCTCCCACTCGTTGTTCGTGCTCACCGGCCTG > NC_002947/3590719‑3591008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |