New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5543748 =73 (1.350)6 (0.120) 6/244 NT 9.6% coding (395/864 nt) PP_4875 membrane protein
?NC_002947 5543800 = 45 (0.890)coding (343/864 nt) PP_4875 membrane protein

AACTCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAT  >  NC_002947/5543601‑5543896
                                                                                                                                                    |                                                                                                                                                    
gtttCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGcc                                                                                                                                                      >  8:74685/4‑148 (MQ=255)
gtttCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGcc                                                                                                                                                      <  7:74685/145‑1 (MQ=255)
aaCTCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGccc                                                                                                                                                     <  2:71020/149‑1 (MQ=255)
    atcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTc                                                                                                                                                  >  8:300175‑M1/145‑149 (MQ=255)
       ccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgtaaaCCTTCGAt                                                                                                                                               >  1:260803‑M1/142‑149 (MQ=255)
       ccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGAt                                                                                                                                               <  6:98910‑M1/8‑1 (MQ=255)
         ccGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGAtttt                                                                                                                                            <  3:284429/149‑1 (MQ=255)
          cGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTc                                                                                                                                           >  8:269899/1‑149 (MQ=255)
          cGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTc                                                                                                                                           >  1:84065/1‑149 (MQ=255)
           gAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCg                                                                                                                                          >  3:153638/1‑149 (MQ=255)
           gAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCg                                                                                                                                          >  8:300773/1‑149 (MQ=255)
               ccTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCAt                                                                                                                                      <  7:300773/149‑1 (MQ=255)
                 tCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATgg                                                                                                                                    >  4:22213/1‑149 (MQ=255)
                     gtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGa                                                                                                                                                <  2:168105‑M1/7‑1 (MQ=255)
                     gtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGa                                                                                                                                                >  1:168105‑M1/128‑134 (MQ=255)
                      ggTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCg                                                                                                                               <  2:30817/149‑1 (MQ=255)
                       gattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCATGGCTTCg                                                                                                                               <  8:218326‑M1/24‑1 (MQ=255)
                       cttGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATAGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCgg                                                                                                                              <  4:6621/148‑1 (MQ=255)
                           tACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCaaa                                                                                                                          <  4:84551/149‑1 (MQ=255)
                            aCAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCaaa                                                                                                                          >  8:37460/1‑148 (MQ=255)
                            aCAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCaaa                                                                                                                          <  7:37460/148‑1 (MQ=255)
                              aaCGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGc                                                                                                                       >  5:260289/1‑149 (MQ=255)
                              aaCGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGc                                                                                                                       >  4:321122/1‑149 (MQ=255)
                                cGCTCCCTGCCAATAGCGCCCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCAACGGTTGCCCTTCGATTTACGGCATGGCTTCGTCAAACGCCt                                                                                                                     >  8:297196/1‑149 (MQ=255)
                                     cctgccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGc                                                                                                                 <  6:260289/148‑1 (MQ=255)
                                     cctgccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGc                                                                                                                 <  6:352298/148‑1 (MQ=255)
                                     cctgccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGc                                                                                                                 <  2:257484/148‑1 (MQ=255)
                                         ccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGc                                                                                                                 >  5:344635/1‑144 (MQ=255)
                                         ccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGc                                                                                                                 <  6:344635/144‑1 (MQ=255)
                                         ccAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAg                                                                                                              <  4:121789/147‑1 (MQ=255)
                                          cAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGca                                                                                                            >  8:165752/1‑148 (MQ=255)
                                            ggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCCGcac                                                                                                           <  7:117973‑M1/44‑1 (MQ=255)
                                              ccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATc                                                                                                        <  2:276524‑M1/47‑1 (MQ=255)
                                                cgcgcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGaa                                                                                                     <  7:269899/149‑1 (MQ=255)
                                                 gcgcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg                                                                                                    <  5:65119/149‑1 (MQ=255)
                                                 gcgcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg                                                                                                    <  1:186901/149‑1 (MQ=255)
                                                 gcgcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGACGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg                                                                                                    >  1:279330/1‑149 (MQ=255)
                                                  cgcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAgg                                                                                                   >  6:333583/1‑149 (MQ=255)
                                                   gcCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGt                                                                                                  <  2:341577/149‑1 (MQ=255)
                                                    tgttgcgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGt                                                                                                  >  7:218326‑M1/97‑149 (MQ=255)
                                                     cAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGttt                                                                                                >  2:103414/1‑149 (MQ=255)
                                                        gcgtgccgagcacccctggagccgtgtggtgctcgccagtgcagtgttcgccggggctttcagcctcgtgcttgatctggcgcgtgcgcaaaCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGtt                                                                                                 >  8:117973‑M1/93‑146 (MQ=255)
                                                        gaTCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcg                                                                                             <  7:297196/148‑1 (MQ=255)
                                                         cgtgccgagcacccctggagccgggtgttgctcgccagtgccgtgttcgccgtggctttcagcctcgtgcttgatctggcgctggcgcaaaCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                              >  1:276524‑M1/92‑148 (MQ=255)
                                                         aTCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgc                                                                                            >  5:88168/1‑149 (MQ=255)
                                                          tCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                              >  3:318134/1‑146 (MQ=255)
                                                          tCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                              <  4:318134/146‑1 (MQ=255)
                                                           cAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                              <  6:268301/145‑1 (MQ=255)
                                                           cAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                              >  5:268301/1‑145 (MQ=255)
                                                               gCCAGCACACTGAACAATTGCACCGTGACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgccagcgc                                                                                      >  1:8932/1‑149 (MQ=255)
                                                                 cAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg                                                                                                    <  6:31997/133‑1 (MQ=255)
                                                                 cAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAg                                                                                                    >  5:31997/1‑133 (MQ=255)
                                                                   gCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGa                                                                                  <  2:84065/149‑1 (MQ=255)
                                                                     acacTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGAt                                                                                 >  5:46411/1‑148 (MQ=255)
                                                                      cacTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATc                                                                                >  7:322901/1‑148 (MQ=255)
                                                                            aCAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCAc                                                                          >  1:153557/1‑148 (MQ=255)
                                                                             cAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGa                                                                        <  3:321122/149‑1 (MQ=255)
                                                                              aaTTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATGCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCAc                                                                          >  1:72090/1‑147 (MQ=255)
                                                                              aaTTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAg                                                                       >  5:174309/1‑149 (MQ=255)
                                                                               aTTGAACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCTGCATGGCTTCGTCAAACGCCTTGGCCATCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAgg                                                                      <  7:316817/149‑1 (MQ=255)
                                                                                  gCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCt                                                                    <  2:72090/148‑1 (MQ=255)
                                                                                    aCCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCg                                                                                                                                          <  8:136886/76‑1 (MQ=255)
                                                                                    aCCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCg                                                                                                                                          >  7:136886/1‑76 (MQ=255)
                                                                                    aCCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGa                                                                  >  8:131253/1‑148 (MQ=255)
                                                                                     ccGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGTCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGaaa                                                                <  6:88168/149‑1 (MQ=255)
                                                                                        tCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGcc                                                             <  7:131253/149‑1 (MQ=255)
                                                                                            tgctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACgg                                                         >  6:278881/1‑149 (MQ=255)
                                                                                              ctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCg                                                                                                       <  8:275433/101‑1 (MQ=255)
                                                                                              ctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCg                                                                                                       >  7:275433/1‑101 (MQ=255)
                                                                                              ctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACgg                                                         <  2:8932/147‑1 (MQ=255)
                                                                                              ctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCg                                                       <  4:153638/149‑1 (MQ=255)
                                                                                                 tgGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCAc                                                           <  7:59629/142‑1 (MQ=255)
                                                                                                 tgGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCAc                                                           >  8:59629/1‑142 (MQ=255)
                                                                                                 tgGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGaa                                                     <  6:46411/148‑1 (MQ=255)
                                                                                                         aCCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACt                                            >  5:202127/1‑149 (MQ=255)
                                                                                                           cAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTgg                                          <  8:322901/149‑1 (MQ=255)
                                                                                                              cacaGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGc                                         >  3:308637/1‑147 (MQ=255)
                                                                                                              cacaGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa                                       <  7:165752/149‑1 (MQ=255)
                                                                                                              cacaGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa                                       <  2:153557/149‑1 (MQ=255)
                                                                                                              cacaGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa                                       <  6:202127/149‑1 (MQ=255)
                                                                                                                 aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGaaa                                                                >  2:112972/1‑121 (MQ=255)
                                                                                                                 aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGaaa                                                                <  1:112972/121‑1 (MQ=255)
                                                                                                                 aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc                                     >  8:101123/1‑148 (MQ=255)
                                                                                                                              cTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTc                         >  5:89644/1‑148 (MQ=255)
                                                                                                                                  ccGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAggg                    <  6:89644/149‑1 (MQ=255)
                                                                                                                                          cACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCgg            <  5:333583/149‑1 (MQ=255)
                                                                                                                                            ccGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCa          >  3:307734/1‑149 (MQ=255)
                                                                                                                                               gTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACg        >  7:132340/1‑148 (MQ=255)
                                                                                                                                                    CCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGGCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAt  <  5:98910‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AACTCGCGACCGAAGCCTCCAGGGTTGTACAACGCTGCCTGCCAATAGCGCGCCAGCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAT  >  NC_002947/5543601‑5543896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.