New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5661040	48 (0.890)	3 (0.060)	3/240	NT	6.6%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661069	41 (0.820)					coding (694/1701 nt)	ligB	DNA ligase B

GCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTGGTATCGCTC  >  NC_002947/5660900‑5661187                                                                                                                                              |                                                                                                                                                    gCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTggg                                                                                                                                             >  3:196562/1‑149 (MQ=255)  cACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTgg                                                                                                                                              <  2:88092/147‑1 (MQ=255)  cACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTgg                                                                                                                                              <  7:249982/147‑1 (MQ=255)       gCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGc                                                                                                                                       >  7:320583/1‑149 (MQ=255)        cAAGGTGAGCTGTATGTGCTCCTGGACGAACATGTGCAAGACAAGGCAGGCAGCGACAAGGGCCTTGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGc                                                                                                                                       <  3:127061/148‑1 (MQ=255)        cAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGcc                                                                                                                                      <  6:283420/149‑1 (MQ=255)         aaGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCg                                                                                                                                     >  1:45109/1‑149 (MQ=255)           ggTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCa                                                                                                                                   <  8:320583/149‑1 (MQ=255)                 cTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGccc                                                                                                                             >  5:67706/1‑149 (MQ=255)                      tCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGc                                                                                                                        >  8:126905/1‑149 (MQ=255)                        tGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaa                                                                                                                      <  7:18045‑M2/149‑3 (MQ=255)                          cgcCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGc                                                                                                                        <  8:203286/145‑1 (MQ=255)                          agccTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGTGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaaca                                                                                                                    >  6:103534‑M2/2‑145 (MQ=255)                             cTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggc                                                                                                                 >  7:162801‑M2/1‑142 (MQ=255)                             cTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggc                                                                                                                 >  5:37651‑M2/1‑142 (MQ=255)                                gACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTgctcggggccgtgcggccagccccacacgaacaggcc                                                                                                                <  7:166723‑M1/147‑38 (MQ=255)                                 aCGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGaa                                                                                                             <  1:11663/149‑1 (MQ=255)                                   gAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACg                                                                                                           >  6:241082/1‑149 (MQ=255)                                     aCATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGc                                                                                                          >  4:172885/1‑148 (MQ=255)                                       aTGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTc                                                                                                       >  6:293316/1‑149 (MQ=255)                                         gtgCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTg                                                                                                                                         <  5:295484/113‑1 (MQ=255)                                         gtgCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTg                                                                                                                                         >  6:295484/1‑113 (MQ=255)                                            cAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCa                                                                                                  <  7:195588/149‑1 (MQ=255)                                             aaGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTgctcggggccgtgcggccagccccacac                                                                                                                         >  2:19436‑M1/1‑97 (MQ=255)                                             aaGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTgctcggggccgtgcggccagccccacac                                                                                                                         <  1:19436‑M1/125‑29 (MQ=255)                                                ccAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTg                                                                                              <  3:172885/149‑1 (MQ=255)                                                ccAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTg                                                                                              <  4:196562/149‑1 (MQ=255)                                                  aaGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGc                                                                                            <  6:67706/149‑1 (MQ=255)                                                           agtgcCAACGCCCGGGGTACCGTGGGAGGGCTGCTCGCACGAAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCATCTGGCACGACTggg                                                                                   <  2:111121/146‑1 (MQ=255)                                                            gcgcCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGt                                                                                  <  5:53484/149‑1 (MQ=255)                                                                    gCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGa                                                                          >  4:60914/1‑149 (MQ=255)                                                                      ccGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTc                                                                              <  1:279257/143‑1 (MQ=255)                                                                      ccGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTc                                                                              >  2:279257/1‑143 (MQ=255)                                                                          ggTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcagcca                                                                    <  7:126905/149‑1 (MQ=255)                                                                           gTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGAcagccag                                                                   <  5:293316/149‑1 (MQ=255)                                                                              ccGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCtt                                                                >  8:48136/1‑149 (MQ=255)                                                                                   gCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGcc                                                                                                    >  1:265101/1‑108 (MQ=255)                                                                                   gCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGcc                                                                                                    <  2:265101/108‑1 (MQ=255)                                                                                    cAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAg                                                           >  3:318118/1‑148 (MQ=255)                                                                                         ctgctCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCa                                                                                                                                   >  4:26090/1‑71 (MQ=255)                                                                                         ctgctCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCa                                                                                                                                   <  3:26090/71‑1 (MQ=255)                                                                                                 acgcaAGCAACTGACTGGCGCACAAGGCAACGCTGATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTAc                                                             >  1:220929/1‑134 (MQ=255)                                                                                                 acgcaAGCAACTGACGGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGGTTGGGGCTGGCCGCAGGGCCCCGTGCAACAGGCCGAAGGCCTCGCCCTGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTAc                                                             <  2:220929/133‑1 (MQ=255)                                                                                                        caaCTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTgga                                      <  2:82823/149‑1 (MQ=255)                                                                                                              actgGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGAt                                  <  4:318118/147‑1 (MQ=255)                                                                                                                tgGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATgcag                              >  3:146382/1‑149 (MQ=255)                                                                                                                    gcACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGcaca                          >  4:82604/1‑149 (MQ=255)                                                                                                                       caAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACTGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTg                       >  3:91374/1‑149 (MQ=255)                                                                                                                          ggCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGgcg                    >  5:162421/1‑149 (MQ=255)                                                                                                                             aaCGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGa                                                                          <  1:114450/92‑1 (MQ=255)                                                                                                                             aaCGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGa                                                                          >  2:114450/1‑92 (MQ=255)                                                                                                                             aaCGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGgcgc                   >  1:143068/1‑147 (MQ=255)                                                                                                                                     tCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTg           <  3:82604/148‑1 (MQ=255)                                                                                                                                     tCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTg           <  8:18045/148‑1 (MQ=255)                                                                                                                                     tCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTg           <  5:241082/148‑1 (MQ=255)                                                                                                                                       ggCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtc          <  7:166723‑M2/147‑111 (MQ=255)                                                                                                                                        gCCTGTTgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtccag       >  7:162801‑M1/1‑7 (MQ=255)                                                                                                                                        gCCTGTTgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtccag       >  5:37651‑M1/1‑7 (MQ=255)                                                                                                                                           tGTTgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccacgggcgttggcgctgcctgccttggcttgcacatgttcgtccaggct    >  6:103534‑M1/1‑4 (MQ=255)                                                                                                                                             ttgctcggggccgtgcggccagccccacacgaacaggccgatagcgttgccttgtgcgccagtcagttgcttgcgtgcgagcagccctgccacggtaccccgggcgttggcgctgcctgccttggcttgcacatgttcgtccaggcgca  <  7:18045‑M1/149‑148 (MQ=255)                                                                                                                                              |                                                                                                                                                    GCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCT‑ATCGGCCTGTTCGTGTGGGGCTGGCCGCACGGCCCCGAGCAACAGGCCGAACGCCTCGCCCAGCTGGCACGACTGGGTTTTCCGGACAGCCAGCTTTACAGCATCGCCATCGACACGCTGGAGGATGCAGCACACTGGCGCGAGCACTGGTATCGCTC  >  NC_002947/5660900‑5661187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.