New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5852239 =70 (1.290)4 (0.080) 4/250 NT 5.9% coding (55/1089 nt) PP_5129 hypothetical protein
?NC_002947 5852274 = 60 (1.150)coding (20/1089 nt) PP_5129 hypothetical protein

TCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCGTTGTAG  >  NC_002947/5852094‑5852386
                                                                                                                                                   |                                                                                                                                                    
tCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAAc                                                                                                                                                   >  1:231211/1‑149 (MQ=255)
 tgtcccagttgctgcccttctgggaattgtctgctacaacgaagctttgaaggggcgtgtcgacaaggaggttcagcaacgtcgattgaatctccctgtgtatgctcgtcctgggtggtacttctaatgatccactttatgcaaggTaa                                                                                                                                                    <  6:266319‑M1/3‑1 (MQ=255)
  aCGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCGTTTGCAGCCAGCAGCATACTGGCGATAGTTCTCGACAAACCGCTCCTTGAACATCACCGCGATGCCTTTCCCCATCACCCCTACGGTTTTAACTGTGTTAAc                                                                                                                                                   >  1:244366/1‑148 (MQ=255)
          cAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGACCATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCg                                                                                                                                         >  2:157796/1‑149 (MQ=255)
             tgcccttctgggaattatctgctacaacgaagctttgaaggggcgtgtcgacaaggaggttcagcaacgtcgattgaatctccctgtgtatgctcgtcctgggtggtacttctaatgatccactttatgcaaggTAACCAGCGCTTCgg                                                                                                                                        <  7:292628‑M1/15‑1 (MQ=255)
             tAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGcc                                                                                                                                      <  7:157201/149‑1 (MQ=255)
                caaacaTCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTg                                                                                                                                  <  5:202158/149‑1 (MQ=255)
                 aaacaTCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTgg                                                                                                                                 >  7:255109/1‑149 (MQ=255)
                 aaacaTCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTgg                                                                                                                                 >  5:216107/1‑149 (MQ=255)
                 aaacaTCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAAAGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACACATACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTgg                                                                                                                                 >  3:212175/1‑149 (MQ=255)
                        ttCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCcag                                                                                                                          >  6:318572/1‑149 (MQ=255)
                           ccGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCcagcag                                                                                                                       <  5:318572/149‑1 (MQ=255)
                           ccGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCAGCCTTGGCCTCcagcag                                                                                                                       >  8:32478/1‑149 (MQ=255)
                            cGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAgg                                                                                                                      <  1:131953/149‑1 (MQ=255)
                             ggTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCcagcag                                                                                                                       <  4:248923/147‑1 (MQ=255)
                             ggTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCcagcag                                                                                                                       >  3:248923/1‑147 (MQ=255)
                                  cTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCt                                                                                                                <  7:78938/149‑1 (MQ=255)
                                   tACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCtt                                                                                                               >  6:71429/1‑149 (MQ=255)
                                    aCCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTg                                                                                                              >  2:84265/1‑149 (MQ=255)
                                     ccTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTg                                                                                                              >  1:253429/1‑148 (MQ=255)
                                     ccTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGc                                                                                                             <  2:244366/149‑1 (MQ=255)
                                     caacgaagctttgaaggggcgtgtcgacaaggaggttcagcaacgtcgattgaatctccctgtgtatgctcgtcctgggtggtacttctaatgatccactttatgcaaggTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCtt                                                                                                               >  8:292628‑M1/111‑149 (MQ=255)
                                         tttCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATa                                                                                                          >  3:122121/1‑148 (MQ=255)
                                          ttCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCATGGCCTCCAGCAGGTTACCTTGCATa                                                                                                          >  1:75985/1‑148 (MQ=255)
                                          ttCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATa                                                                                                          >  2:146398/1‑147 (MQ=255)
                                             gCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTg                                                                                                     <  2:231211/149‑1 (MQ=255)
                                                   gcaggcagCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATc                                                                                                 <  6:216107/148‑1 (MQ=255)
                                                     aggcagCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCAt                                                                                               <  8:156292/148‑1 (MQ=255)
                                                     aggcagCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTACGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCag                                                                                               >  3:78051/1‑147 (MQ=255)
                                                        cagcagcaTACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCTGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGa                                                                                           <  7:32478/149‑1 (MQ=255)
                                                           cagcaTACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGt                                                                                        <  8:255109/149‑1 (MQ=255)
                                                             gcaTACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTac                                                                                      >  3:310403/1‑149 (MQ=255)
                                                               aTACTGGCGATGGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTacca                                                                                    <  6:161518/149‑1 (MQ=255)
                                                                     tcGATAGTTCTCGACAAAACTCTCCTTGAACATCAGAGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGACTCCAGCAGGTTACCTTGCATAAAGTg                                                                                                     <  8:213120/125‑1 (MQ=255)
                                                                     gCGATAGTTCTCGACAAAACGCTCGTTGAACATCAGCGCGATGCCTTTCCCCATAACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGCTTACCTTGCATAAAGTg                                                                                                     >  7:213120/1‑126 (MQ=255)
                                                                     gCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGt                                                                                                      >  8:29452/1‑125 (MQ=255)
                                                                     gCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGt                                                                                                      <  7:29452/125‑1 (MQ=255)
                                                                       gATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGAc                                                                            <  2:253429/149‑1 (MQ=255)
                                                                             gcaacgtcgattgaatctccctgtgtatgctcgtcctgggtggtacttctaatgatccacttatgcaaggTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTAcc                                                                                                                 <  1:296209‑M1/37‑1 (MQ=255)
                                                                             gcaacgtcgattgaatctccctgtgtatgctcgtcctgggtggtacttctaatgatccacttatgcaaggTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTAcc                                                                                                                 >  2:296209‑M1/71‑107 (MQ=255)
                                                                                 gACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATa                                                                     <  5:71429/146‑1 (MQ=255)
                                                                                 gACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATa                                                                     <  1:84265/146‑1 (MQ=255)
                                                                                    aaaaCGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGTCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACTAGCATACACAgg                                                               <  4:78051/149‑1 (MQ=255)
                                                                                    aaaaCGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGAGCATTAGAAGTACCACCCAGGACGAGCATACACAgg                                                               >  4:74204/1‑149 (MQ=255)
                                                                                      aaCGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAgg                                                               >  4:259098/1‑147 (MQ=255)
                                                                                        cGCTCGTTGAACATCTGCGCGATGCCTTTCCCCATCATCCCTACGGTGTTAACTGTGTTAACGAGCGGTTCGGCGTTGGCCTGCAGCAGGTTACCTTGAATTAATTGGATCATTAGAAGTAGCACCGAGGACGAGCATACACAGGgaga                                                           <  4:122121/149‑1 (MQ=255)
                                                                                              cTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACAACCCAGGACGAGCATACACAGGGAGATTCa                                                       >  5:12835/1‑148 (MQ=255)
                                                                                               ttGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAg                                                                         <  6:99843/129‑1 (MQ=255)
                                                                                               ttGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAg                                                                         >  5:99843/1‑129 (MQ=255)
                                                                                                       cAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGtt                                                                                                                    >  5:239113/1‑78 (MQ=255)
                                                                                                       cAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGtt                                                                                                                    <  6:239113/78‑1 (MQ=255)
                                                                                                        aGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATcaaatcgg                                             >  1:48157/1‑141 (MQ=255)
                                                                                                        aGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTg                                             <  4:310403/148‑1 (MQ=255)
                                                                                                                 ccTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCATGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAAcctcc                                   <  2:75985/149‑1 (MQ=255)
                                                                                                                  cTTTCCCCATCACCCCTTCGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCATCAGGTTACCTTGCATAATGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAAcctcc                                   <  4:212175/148‑1 (MQ=255)
                                                                                                                  cTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGATGCTGAAcctcct                                  >  2:300572/1‑149 (MQ=255)
                                                                                                                   tttCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGt                                               >  4:327086/1‑135 (MQ=255)
                                                                                                                   tttCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGt                                               <  3:327086/135‑1 (MQ=255)
                                                                                                                       cccATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGa                                                                          >  4:72616/1‑104 (MQ=255)
                                                                                                                       cccATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGa                                                                          <  3:72616/104‑1 (MQ=255)
                                                                                                                        ccATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCAtt                                                                                              >  1:119462/1‑83 (MQ=255)
                                                                                                                        ccATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCAtt                                                                                              <  2:119462/83‑1 (MQ=255)
                                                                                                                             aCCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACg                        <  1:157796/148‑1 (MQ=255)
                                                                                                                               cccTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAAc                                       <  6:205610/131‑1 (MQ=255)
                                                                                                                               cccTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAAc                                       >  5:205610/1‑131 (MQ=255)
                                                                                                                                ccTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTATAAGTACAACCCAGGACGAGCATACACAGGGCGATTCAATCGACGTTGCTGAACCTCCTTGTCGAAACTcccc                    >  2:158421/1‑149 (MQ=255)
                                                                                                                                ccTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGcccc                    >  3:88539/1‑149 (MQ=255)
                                                                                                                                ccTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTAGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCTTTAGAAGTACCCCCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAAGCTCCTTGACGCCACGcccc                    >  2:163592/1‑149 (MQ=255)
                                                                                                                                         ttAACTGTGTTAACCAGCGCTTCGGCCTTGGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGc            >  1:200784/1‑149 (MQ=255)
                                                                                                                                         ttAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAggg                                                              <  7:148381/98‑1 (MQ=255)
                                                                                                                                         ttAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAggg                                                              >  8:148381/1‑98 (MQ=255)
                                                                                                                                           taCTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTc         <  5:301443/148‑1 (MQ=255)
                                                                                                                                            aCTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTc         <  3:259098/148‑1 (MQ=255)
                                                                                                                                            aCTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCg        >  4:6285/1‑149 (MQ=255)
                                                                                                                                            aCTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCg        >  2:228404/1‑149 (MQ=255)
                                                                                                                                            aCTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCg        <  1:228404/149‑1 (MQ=255)
                                                                                                                                             cTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCATTGTCGACACGCCCCTTCAAAGCTTc         >  6:301443/1‑147 (MQ=255)
                                                                                                                                              tgtgTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCGtt      >  6:43211/1‑149 (MQ=255)
                                                                                                                                               gtgtTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCGTTg     >  6:42219/1‑149 (MQ=255)
                                                                                                                                                tgtTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCGtt      <  1:146398/147‑1 (MQ=255)
                                                                                                                                                  ttAATCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACCCCCCTTCAAAGCTTCGTTg     >  7:283683/1‑146 (MQ=255)
                                                                                                                                                  ttAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCGTTGTAg  <  3:6285/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACGCTCCTTGAACATCAGCGCGATGCCTTTCCCCATCACCCCTACGGTGTTAACTGTGTTAACCAGCGCTTCGGCCTTGGCCTCCAGCAGGTTACCTTGCATAAAGTGGATCATTAGAAGTACCACCCAGGACGAGCATACACAGGGAGATTCAATCGACGTTGCTGAACCTCCTTGTCGACACGCCCCTTCAAAGCTTCGTTGTAG  >  NC_002947/5852094‑5852386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.