New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5978785	69 (1.280)	5 (0.090)	4/254	NT	6.4%	coding (332/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	= 5978841	78 (1.480)					coding (276/993 nt)	PP_5241	LuxR family transcriptional regulator

CTCGGCACTGGCAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGTTATT  >  NC_002947/5978643‑5978933                                                                                                                                               |                                                                                                                                                       cTCGGCACTGGCAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCTGGCcgcg                                                                                                                                                    >  1:55634‑M1/1‑143 (MQ=255) cTCGGCACTGGCAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCgca                                                                                                                                                  <  5:23215/149‑1 (MQ=255)         tGGCAAACAAGTGGTGCGGGATGTCCTGCGCGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGAc                                                                                                                                        >  7:145288/1‑149 (MQ=255)            cAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCCCCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTg                                                                                                                                     >  6:92107/1‑149 (MQ=255)              aaCAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGcc                                                                                                                                   >  4:337247/1‑149 (MQ=255)                  aggggtgCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAAt                                                                                                                               <  4:123280/146‑1 (MQ=255)                  aGTGGTGCGGGATGTCCTGCGTGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAAt                                                                                                                               <  6:246199/149‑1 (MQ=255)                         cGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCa                                                                                                                         <  6:55281/148‑1 (MQ=255)                           ggATGTCCTGCGAGCGCAACAGGCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAAt                                                                                                                               <  8:51717/140‑1 (MQ=255)                           ggATGTCCTGCGAGCGCAACAGGCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAAt                                                                                                                               >  7:51717/1‑140 (MQ=255)                               gTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGct                                                                                                                  >  2:179048/1‑149 (MQ=255)                                 ccTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCaa                                                                                                                                <  4:112985/133‑1 (MQ=255)                                 ccTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCaa                                                                                                                                >  3:112985/1‑133 (MQ=255)                                 ccTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGctcc                                                                                                                >  4:285464/1‑149 (MQ=255)                                  cTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGctcct                                                                                                               >  3:24855/1‑149 (MQ=255)                                  cTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGctcct                                                                                                               >  1:59570/1‑149 (MQ=255)                                       aGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAgg                                                                                                          <  2:59570/149‑1 (MQ=255)                                        gcgcAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGc                                                                                                         >  2:40462/1‑149 (MQ=255)                                          gcAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCt                                                                                                        >  4:86919/1‑148 (MQ=255)                                          gcAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTg                                                                                                       <  6:48715/149‑1 (MQ=255)                                            aaCAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCcgcgcagatcagcctcgaggagcctggtgaggcattgggcaggtcgttg                                                                                                       >  8:173498‑M1/1‑100 (MQ=255)                                                gCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTgc                                                                                                 <  8:145288/149‑1 (MQ=255)                                                    gCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGg                                                                                             <  6:278614‑M2/149‑2 (MQ=255)                                                      ccAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCcgcgcagatcagcctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcc                                                                                             <  7:173498‑M1/149‑60 (MQ=255)                                                      ccAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGgcc                                                                                           >  7:143962‑M2/1‑146 (MQ=255)                                                      ccAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGgc                                                                                            <  7:165990‑M2/148‑3 (MQ=255)                                                        aaCGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAg                                                                                         <  3:86919/149‑1 (MQ=255)                                                         aCGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAgg                                                                                        <  1:40462/149‑1 (MQ=255)                                                           gcgGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCTGGCcgcgcagatcagcctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcctggcc                                                                                        <  2:55634‑M1/149‑65 (MQ=255)                                                                   cACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGcccc                                                                              >  7:297333/1‑149 (MQ=255)                                                                    aCCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCg                                                                             >  5:202343/1‑149 (MQ=255)                                                                     ccGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCgg                                                                            <  6:202343/149‑1 (MQ=255)                                                                          gaGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCt                                                                                                        <  7:302136/116‑1 (MQ=255)                                                                          gaGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCt                                                                                                        >  8:302136/1‑116 (MQ=255)                                                                                tcATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGt                                                                 <  1:179048/149‑1 (MQ=255)                                                                                  aTCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCt                                                               <  5:278614/149‑1 (MQ=255)                                                                                     caccaccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGGGCAACGACCTGCCCAATGCAACACCAGGCACCTCGAGGCAGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTcgg                                                              >  1:275962/1‑147 (MQ=255)                                                                                       ccaccaACACCGGCAAATTCACGCGCTCATCGAGCGGCTAGACACTCTCGGCAAGGCTGAGCA‑‑GCAACGACCTGCCAAATGCCTCACCACGCACCACGAGGCTGATCTGCGCGGCCAGGCCATAGCCCCGGCGCGGAACGCTCGGGAt                                                           >  3:307973/1‑148 (MQ=255)                                                                                        caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCcgcgcagatcaacctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcc                                                                                             >  7:247283‑M1/1‑56 (MQ=255)                                                                                        caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCcgcgcagatcaacctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcc                                                                                             <  8:247283‑M1/115‑60 (MQ=255)                                                                                        caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGAt                                                           >  7:28714/1‑147 (MQ=255)                                                                                             acacCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCa                                                    <  3:337247/149‑1 (MQ=255)                                                                                             acacCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCa                                                    >  7:2545/1‑149 (MQ=255)                                                                                             acacCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCa                                                    <  8:165990/149‑1 (MQ=255)                                                                                               acCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACg                                                  <  2:113826/149‑1 (MQ=255)                                                                                                 cGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGa                                                            >  7:86951/1‑137 (MQ=255)                                                                                                 cGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGa                                                            <  8:86951/137‑1 (MQ=255)                                                                                                 cGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGt                                                >  4:202600/1‑149 (MQ=255)                                                                                                 cGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGATGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGt                                                >  2:12202/1‑149 (MQ=255)                                                                                                  ggCACATTCACGGGCTCATCGAGCGGCGCGACACTCTCCGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCGCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTc                                               <  4:292834/149‑1 (MQ=255)                                                                                                  ggCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTc                                               <  3:270443/149‑1 (MQ=255)                                                                                                    cacaTTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGGA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGc                                             <  8:2545/149‑1 (MQ=255)                                                                                                    cacaTTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGc                                             <  8:28714/149‑1 (MQ=255)                                                                                                       aTTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCa                                           >  5:157572/1‑148 (MQ=255)                                                                                                        ttCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         <  4:24855/149‑1 (MQ=255)                                                                                                           aCGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         <  6:147198/146‑1 (MQ=255)                                                                                                           aCGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         >  3:283085/1‑146 (MQ=255)                                                                                                           aCGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         >  5:147198/1‑146 (MQ=255)                                                                                                           aCGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         <  4:283085/146‑1 (MQ=255)                                                                                                               gcTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTg                                  >  1:140145/1‑149 (MQ=255)                                                                                                               gcTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTg                                  >  1:275166/1‑149 (MQ=255)                                                                                                                   aTCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         <  6:89836/138‑1 (MQ=255)                                                                                                                   aTCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCaaa                                         >  5:89836/1‑138 (MQ=255)                                                                                                                   aTCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTgcg                                <  2:275166/147‑1 (MQ=255)                                                                                                                   aTCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTgcg                                >  7:30092/1‑147 (MQ=255)                                                                                                                     cGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCgcag                             >  8:222548/1‑148 (MQ=255)                                                                                                                        gCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACg                                                  <  6:105365/124‑1 (MQ=255)                                                                                                                        gCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACg                                                  >  5:105365/1‑124 (MQ=255)                                                                                                                               gACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCTGCGCAAggcctt                    <  3:285464/147‑5 (MQ=255)                                                                                                                               gACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGacac                    <  3:202600/147‑1 (MQ=255)                                                                                                                               gACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACAcc                   <  5:92107/148‑1 (MQ=255)                                                                                                                                 cAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTg                 >  2:263025/1‑148 (MQ=255)                                                                                                                                  aGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAg                         <  4:231271/139‑1 (MQ=255)                                                                                                                                  aGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAg                         >  3:231271/1‑139 (MQ=255)                                                                                                                                   gTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAc              <  4:337605/149‑1 (MQ=255)                                                                                                                                        ggCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGgccaggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtggtggatgacgactcgtcggtgcgcaccgc         <  2:55634‑M2/149‑86 (MQ=255)                                                                                                                                        ggCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGc          <  8:30092/148‑1 (MQ=255)                                                                                                                                        ggCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGc          >  2:193445/1‑148 (MQ=255)                                                                                                                                          ccAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAg       <  7:222548/149‑1 (MQ=255)                                                                                                                                           cAGGCTGCTCA‑‑GCAACGACCTGCCCAATGCCTCCCCTGTCTCCTCGAGGTTTATGTGCGCGTCGAGGCGATATGCCCGGCGCGTAACGTTCTGGTTCTGGCGACGGGCGCCAAAGGCCTTGCGCAGCAAGGACACATGAACGTGCAAGt      <  4:307973/149‑1 (MQ=255)                                                                                                                                           cAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGt      >  1:131621/1‑149 (MQ=255)                                                                                                                                             ggCcgcgcagatcagcctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcctggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtggtggatgacgactcgtcggtgcgcaccgcgttgg      >  7:143962‑M1/1‑3 (MQ=255)                                                                                                                                             ggCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGTTGATCTGCGCGgcctggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtg                                      <  8:247283‑M2/115‑57 (MQ=255)                                                                                                                                             ggCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGTTGATCTGCGCGgcctggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtg                                      >  7:247283‑M2/1‑59 (MQ=255)                                                                                                                                             ggCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGgcctggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtggtggatgacgactcgtcggtgcgcaccgcgttgg    <  7:173498‑M2/149‑91 (MQ=255)                                                                                                                                              gCcgcgcagatcagcctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcctggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtggtggatgacgactcgtcggtgcgcaccgcgttgg      <  7:165990‑M1/148‑147 (MQ=255)                                                                                                                                               ccgcgcagatcagcctcgaggagcctggtgaggcattgggcaggtcgttgctgcgcagcctggccgagactgtcgagccgctcgatgagcgcgtgaatgtgccggtgttggtggtggatgacgactcgtcggtgcgcaccgcgttgggc    <  6:278614‑M1/149‑149 (MQ=255)                                                                                                                                               cTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGTTAtt  <  6:157572/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                       CTCGGCACTGGCAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCA‑‑GCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGTTATT  >  NC_002947/5978643‑5978933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.