New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6178538 =74 (1.370)5 (0.100) 5/252 NT 6.9% coding (540/1545 nt) atpA ATP synthase subunit alpha
?NC_002947 6178598 = 64 (1.220)coding (480/1545 nt) atpA ATP synthase subunit alpha

ACTGGCAACAACCACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGCCACTTTC  >  NC_002947/6178394‑6178685
                                                                                                                                                   |                                                                                                                                                   
aCTGGCAACAACCACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCa                                                                                                                                                 >  8:56405/1‑149 (MQ=255)
  tGGCAACAACCACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGCACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTGACTGGTTGATGATGGCGT‑‑CGATGGCCAtc                                                                                                                                               >  8:302836/1‑148 (MQ=255)
    gCAACAACCACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGc                                                                                                                                             >  7:91561/1‑149 (MQ=255)
          acCACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCtt                                                                                                                                       <  2:182222/149‑1 (MQ=255)
           ccACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTg                                                                                                                                      >  2:238835/1‑149 (MQ=255)
            cACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGc                                                                                                                                     >  8:244896/1‑149 (MQ=255)
            cACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGc                                                                                                                                     >  1:151799/1‑149 (MQ=255)
                 tGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATc                                                                                                                                >  6:125669/1‑149 (MQ=255)
                 tGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATc                                                                                                                                <  5:113934/149‑1 (MQ=255)
                    tgtTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGa                                                                                                                             <  5:83528/149‑1 (MQ=255)
                       aggtcctctgggcaacacccagaccgacgcagtcgagaaagtggctccaggcgtgatctggcgtaagtcggtagaccagcctgtacagactggttacaaatccgtcgacgccatgatccctgtcGGCCATGGCGGTCTTGCCGATCTGa                                                                                                                             <  8:139755‑M1/25‑1 (MQ=255)
                         gCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTc                                                                                                                        >  4:194817/1‑149 (MQ=255)
                              ggCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCaa                                                                                                                   >  8:39634/1‑149 (MQ=255)
                               tgggcaacacccagaccgacgcagtcgagaaagtggctccaggcgtgatctggcgtaagtcggtagaccagcctgtacagactggttacaaatccgtcgacgccatgatccctgtcGGCCATGGCGGTCTTGCCGATCTGACGGTCGc                                                                                                                      <  4:138357‑M1/32‑1 (MQ=255)
                                   cGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATc                                                                                                              <  8:91561/149‑1 (MQ=255)
                                   cGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATc                                                                                                              <  7:6146/149‑1 (MQ=255)
                                     gTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTTGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAg                                                                                                            <  3:194817/149‑1 (MQ=255)
                                     gTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAg                                                                                                            >  3:210931/1‑149 (MQ=255)
                                            ccAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCa                                                                                                        <  3:198103/146‑1 (MQ=255)
                                              aGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCt                                                                                                                               >  8:222403/1‑121 (MQ=255)
                                              aGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCt                                                                                                                               <  7:222403/121‑1 (MQ=255)
                                               gCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTgg                                                                                                  >  6:221034/1‑149 (MQ=255)
                                                    cGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACATAAAATACCGTAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCTATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACg                                                                                             <  7:111253/149‑1 (MQ=255)
                                                      gtcgagaaagtggctccaggcgtgatctggcgtaagtcggtagaccagcctgtacagactggttacaaatccgtcgacgccatgatccctgtcGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCAc                                                                                              >  7:139755‑M1/94‑149 (MQ=255)
                                                         gATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGa                                                                                        <  7:244896/149‑1 (MQ=255)
                                                         gATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGa                                                                                        >  2:4920/1‑149 (MQ=255)
                                                          agaaagtggctccaggcgtgatctggcgtaagtcggtagaccagcctgtacagactggttacaaatccgtcgacgccatgatccctgtcGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGcc                                                                                          >  3:138357‑M1/90‑149 (MQ=255)
                                                           tGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCCCGCTGGCCACGGCCGa                                                                                        >  4:157843/1‑147 (MQ=255)
                                                            gTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAg                                                                                     >  8:47507/1‑149 (MQ=255)
                                                             ttGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAg                                                                                     <  2:151799/148‑1 (MQ=255)
                                                               ggCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGa                                                                                  >  7:252798/1‑149 (MQ=255)
                                                                tggctccaggcgtgatctggcgtaagtcggtagaccagcctgtacagactggttacaaatccgtcgacgccatgatccctgtcGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAgg                                                                                    >  8:288719‑M1/84‑149 (MQ=255)
                                                                gCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGa                                                                                  <  7:47507/148‑1 (MQ=255)
                                                                  aaCGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCa                                                                                                                    >  1:214188/1‑112 (MQ=255)
                                                                  aaCGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCa                                                                                                                    <  2:214188/112‑1 (MQ=255)
                                                                      gTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCCGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGc                                                                           <  7:302836/149‑1 (MQ=255)
                                                                       tGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCg                                                                          >  1:74252/1‑149 (MQ=255)
                                                                        ggAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGt                                                                         >  5:128559/1‑149 (MQ=255)
                                                                         gAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTc                                                                        >  7:202801/1‑149 (MQ=255)
                                                                          aaCGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCg                                                                       >  7:289162/1‑149 (MQ=255)
                                                                                 cTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGAtt                                                                >  1:330296/1‑149 (MQ=255)
                                                                                 cTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGAt                                                                 <  1:4920/148‑1 (MQ=255)
                                                                                 cTGGCAGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGAt                                                                 <  8:252798/148‑1 (MQ=255)
                                                                                   ggCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGTGGCGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGAtt                                                                >  1:94966/1‑149 (MQ=255)
                                                                                      cGACTGCAAGATAAACAGAGAAAATTCGGGTGTCTTTGTGGTTGATGATGGCGT‑‑CGATGGGCATGGCGGTCTTGCCGATCTTACTGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTat                                                           <  8:274323/149‑2 (MQ=255)
                                                                                      cGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTaa                                                           <  2:34390/149‑1 (MQ=255)
                                                                                         cTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAAc                                                          >  3:92374/1‑147 (MQ=255)
                                                                                         cTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCa                                                        <  1:238835/149‑1 (MQ=255)
                                                                                            cAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGt                                                      <  2:330296/148‑1 (MQ=255)
                                                                                            cAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTc                                                     >  5:142446/1‑149 (MQ=255)
                                                                                              aCATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCt                                                    >  3:176578/1‑148 (MQ=255)
                                                                                                  aaaCACAGAAAATACCGGAGTCTTTCTGGTGTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTa                                                 >  1:205988/1‑148 (MQ=255)
                                                                                                  aaaCACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTa                                                 >  8:5399/1‑147 (MQ=255)
                                                                                                  aaaCACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTa                                                 >  7:60046/1‑147 (MQ=255)
                                                                                                       caGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTg                                          <  8:60046/149‑1 (MQ=255)
                                                                                                         gAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTgg                                         >  3:231600/1‑148 (MQ=255)
                                                                                                           aaaTACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCt                                      <  2:94966/149‑1 (MQ=255)
                                                                                                            aaTACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGAACATGGCGTCGCCGGATTAGTAACCAGTCTCTACAGGCTggacaa                                     >  8:299187/1‑145 (MQ=255)
                                                                                                                 cGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGAc                                >  3:78612/1‑149 (MQ=255)
                                                                                                                   gAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACtt                              <  4:176578/149‑1 (MQ=255)
                                                                                                                   gAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACtt                              <  7:56405/149‑1 (MQ=255)
                                                                                                                   gAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACt                               >  6:274837/1‑148 (MQ=255)
                                                                                                                        tttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACa                                                                                      <  1:26919/88‑1 (MQ=255)
                                                                                                                        tttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACa                                                                                      >  2:26919/1‑88 (MQ=255)
                                                                                                                        tttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGc                          >  6:63414/1‑148 (MQ=255)
                                                                                                                        tttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGc                          >  5:332296/1‑148 (MQ=255)
                                                                                                                        tttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGCTCTACCGACTTACGc                          >  1:288961/1‑148 (MQ=255)
                                                                                                                         ttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGc                          >  5:116016/1‑147 (MQ=255)
                                                                                                                         ttCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGc                          >  5:313302/1‑147 (MQ=255)
                                                                                                                          tCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGcc                         <  2:205988/147‑1 (MQ=255)
                                                                                                                              gTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCa                   >  8:192607/1‑149 (MQ=255)
                                                                                                                              gTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCa                   >  8:23141/1‑149 (MQ=255)
                                                                                                                                   atgatgGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGcc               >  3:48124/1‑149 (MQ=255)
                                                                                                                                    tgatgGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCt              >  3:212270/1‑149 (MQ=255)
                                                                                                                                    tgatgGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCt              <  6:142446/149‑1 (MQ=255)
                                                                                                                                      atgGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTg             <  3:157843/148‑1 (MQ=255)
                                                                                                                                      atgGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTg             <  2:74252/148‑1 (MQ=255)
                                                                                                                                       tgGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGa           <  6:332296/149‑1 (MQ=255)
                                                                                                                                         gCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGc         <  6:128559/149‑1 (MQ=255)
                                                                                                                                          cGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGcc        <  6:313302/149‑1 (MQ=255)
                                                                                                                                            t‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGCCAc      <  4:212270/149‑1 (MQ=255)
                                                                                                                                                  tGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGTCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGCCACTTtc  <  4:210931/149‑1 (MQ=255)
                                                                                                                                                  tGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGCCACTTtc  <  6:116016/149‑1 (MQ=255)
                                                                                                                                                   GGCCATGGCGGTCTTGCCGATGTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGAGAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACTGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGCCACTTtc  >  7:299187‑M1/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
ACTGGCAACAACCACGATGGTGTTGGCCAGGGCGCCGGTTTCTTCCAGCTTGCGAACGATGTTGGCAACGGTGGAACGCTTCTGGCCGACTGCAACATAAACACAGAAAATACCGGAGTCTTTCTGGTTGATGATGGCGT‑‑CGATGGCCATGGCGGTCTTGCCGATCTGACGGTCGCCAATGATCAGCTCACGCTGGCCACGGCCGACAGGGATCATGGCGTCGACGGATTTGTAACCAGTCTGTACAGGCTGGTCTACCGACTTACGCCAGATCACGCCTGGAGCCACTTTC  >  NC_002947/6178394‑6178685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.