New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2076009 =	57 (1.050)	4 (0.080)	3/246	NT	6.3%	coding (525/879 nt)	PP_5479	LysR family transcriptional regulator
	?	NC_002947	2076057 =	65 (1.270)					coding (573/879 nt)	PP_5479	LysR family transcriptional regulator

ACGTCGGCTTTATCGGGCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCGGGGCATGGCCGTCGGC  >  NC_002947/2075909‑2076204                                                                                                                                                     |                                                                                                                                                    cccgatctcgaactgcaccctgcgctgcaaccccaccgcctgaaacgcctcgtcagtctgtcgtcgcgccccggtgccttcggggaagtccaccaacactTCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGaa                                                                                                                                                     >  6:325183‑M1/101‑149 (MQ=255)      ggCTTTATCGGGCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAgtgt                                                                                                                                                 <  2:182326/148‑1 (MQ=255)        tcgaactgcaccctgcgctgcaaccccaccgcctgaaacgcctcgtcagtctgtcgtcgcgccccggtgccttcggggaagtccaccaacactTCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGaa                                                                                                                                                     >  5:72741‑M1/94‑142 (MQ=255)        tcgaactgcaccctgcgctgcaaccccaccgcctgaaacgcctcgtcagtctgtcgtcgcgccccggtgccttcggggaagtccaccaacactTCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGaa                                                                                                                                                     <  6:72741‑M1/49‑1 (MQ=255)        cTTTATCGGGCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTagg                                                                                                                                              >  3:298367/1‑149 (MQ=255)         tttATCGGGCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTtggt                                                                                                                                             >  6:301740/1‑149 (MQ=255)         tttATCGGGCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTtggt                                                                                                                                             >  4:226369/1‑149 (MQ=255)          gaactgcaccctgcgctgcaaccccaccgcctgaaacgcctcgtcagtctgtcgtcgcgccccggtgccttcggggaagtccaccaacactTCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAgt                                                                                                                                                   >  4:184133‑M1/92‑142 (MQ=255)               gggCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACtt                                                                                                                                       >  8:2459/1‑149 (MQ=255)                 gCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTcc                                                                                                                                     <  7:135013/149‑1 (MQ=255)                   tgtgGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGATGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTcccc                                                                                                                                   >  8:107333/1‑149 (MQ=255)                      ggCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCg                                                                                                                                  >  3:27928/1‑147 (MQ=255)                       gCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAg                                                                                                                               >  7:311271/1‑149 (MQ=255)                        cAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAgg                                                                                                                              >  7:286948/1‑149 (MQ=255)                           ggCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCAc                                                                                                                           >  3:311630/1‑149 (MQ=255)                               aaGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCggg                                                                                                                       <  7:2459/149‑1 (MQ=255)                                    gtGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGgcgc                                                                                                                   <  6:178270/148‑1 (MQ=255)                                     tGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGcga                                                                                                                 >  4:141690/1‑149 (MQ=255)                                       cAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGcgac                                                                                                                >  6:84011/1‑148 (MQ=255)                                       cAGGGAGTGCAGCATCGGGTGCTGGACAGGGAAGAACTGGGGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCGGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGcgac                                                                                                                <  4:298367/148‑1 (MQ=255)                                        aGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGcgacga                                                                                                              >  6:120965/1‑149 (MQ=255)                                         gggAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCgacgac                                                                                                             <  8:286948/149‑1 (MQ=255)                                            aGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGa                                                                                                          <  5:120965/149‑1 (MQ=255)                                                  gcaTCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCg                                                                                                                         <  3:157946/128‑1 (MQ=255)                                                  gcaTCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCg                                                                                                                         >  4:157946/1‑128 (MQ=255)                                                   caTCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGa                                                                                                   <  3:226369/149‑1 (MQ=255)                                                    aTCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAg                                                                                                  <  4:311630/149‑1 (MQ=255)                                                        gTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGt                                                                                              >  6:162521/1‑149 (MQ=255)                                                                 cAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCgg                                                                                     <  1:238642/149‑1 (MQ=255)                                                                    ggAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTgg                                                                                  >  6:19059/1‑149 (MQ=255)                                                                     gaagaaCTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTggg                                                                                 <  6:232700/149‑1 (MQ=255)                                                                      aagaaCTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTgggg                                                                                >  1:131949/1‑149 (MQ=255)                                                                           caggtggCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCa                                                                           <  5:301740/147‑1 (MQ=255)                                                                           cTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGcgac                                                                                                                >  6:157556/1‑112 (MQ=255)                                                                           cTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGcgac                                                                                                                <  5:157556/112‑1 (MQ=255)                                                                           cTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTg                                                                             >  4:299111/1‑147 (MQ=255)                                                                           cTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCa                                                                           <  8:311271/149‑1 (MQ=255)                                                                              gtggCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAgcg                                                                        >  4:298553/1‑149 (MQ=255)                                                                              gtggCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAgcg                                                                        >  2:18497/1‑149 (MQ=255)                                                                                 gCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAg                                                                     >  1:162558/1‑149 (MQ=255)                                                                                  cGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAgg                                                                    <  1:18497/149‑1 (MQ=255)                                                                                         gCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGt                                                             >  6:175715/1‑149 (MQ=255)                                                                                          ccGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGtt                                                            >  6:160255/1‑149 (MQ=255)                                                                                           cGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTc                                                           <  5:162521/149‑1 (MQ=255)                                                                                            gTTGGGGCATCGCCTGGCGGGCATGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCg                                                          <  7:107333/149‑1 (MQ=255)                                                                                            gTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTc                                                           >  4:326348/1‑148 (MQ=255)                                                                                                gggCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGAt                                                      <  5:84011/149‑1 (MQ=255)                                                                                                  gCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGttt                                                                                            <  8:219389/109‑1 (MQ=255)                                                                                                  gCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGttt                                                                                            >  7:219389/1‑109 (MQ=255)                                                                                                  gCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTc                                                           >  2:296203/1‑142 (MQ=255)                                                                                                  acttcgcctgccaggtcagccagcgccagctgtgccctgcccgccaggcgaAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTc                                                           >  4:184133‑M2/52‑142 (MQ=255)                                                                                                    ttcgcctgccaggtcagccagcgccagctgtgccctgcccgccaggcgaAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCga                                                         <  6:72741‑M2/93‑1 (MQ=255)                                                                                                    ttcgcctgccaggtcagccagcgccagctgtgccctgcccgccaggcgaAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCga                                                         >  5:72741‑M2/50‑142 (MQ=255)                                                                                                    ttcgcctgccaggtcagccagcgccagctgtgccctgcccgccaggcgaAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCggg                                                  >  6:325183‑M2/50‑149 (MQ=255)                                                                                                    aTCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACa                                                                                                            <  1:142713/91‑1 (MQ=255)                                                                                                    aTCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACa                                                                                                            >  2:142713/1‑91 (MQ=255)                                                                                                       GCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCTGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCa                                                >  3:141690‑M1/1‑148 (MQ=255)                                                                                                          TGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGtt                                            <  4:106251‑M1/149‑1 (MQ=255)                                                                                                          TGGAGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGtt                                            <  2:305107‑M1/149‑1 (MQ=255)                                                                                                            gCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTTGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTc                                           <  3:106251/148‑1 (MQ=255)                                                                                                              gggcagggcaCAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGt                                             <  2:119684/144‑1 (MQ=255)                                                                                                              gggcagggcaCAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTc                                        <  2:131949/149‑1 (MQ=255)                                                                                                              gggcagggcaCAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGAGCGGGCATGt                                             >  1:119684/1‑144 (MQ=255)                                                                                                               ggcagggcaCAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCt                                       <  5:160255/149‑1 (MQ=255)                                                                                                                      cacaGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAgg                                                                                                 <  8:177549/84‑1 (MQ=255)                                                                                                                      cacaGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAgg                                                                                                 >  7:177549/1‑84 (MQ=255)                                                                                                                      cacaGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCtggtg                                   >  6:15498/1‑146 (MQ=255)                                                                                                                       acaGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGgag                                >  7:184471/1‑148 (MQ=255)                                                                                                                       acaGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGgag                                >  6:345251/1‑148 (MQ=255)                                                                                                                              gcgctggcTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTc                          <  5:79097/147‑1 (MQ=255)                                                                                                                              gcgctggcTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGt                        <  2:162558/149‑1 (MQ=255)                                                                                                                                     ctgACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCgg                 <  3:298553/149‑1 (MQ=255)                                                                                                                                      tgACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCggg                                                  <  3:93797/115‑1 (MQ=255)                                                                                                                                      tgACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCggg                                                  >  4:93797/1‑115 (MQ=255)                                                                                                                                      tgACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCggg                >  5:173998/1‑149 (MQ=255)                                                                                                                                        aCCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCgggg               <  1:296203/148‑1 (MQ=255)                                                                                                                                        aCCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCggg                <  3:326348/147‑1 (MQ=255)                                                                                                                                               aggcgaAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCGGGGCATGGCCg       >  8:304784‑M2/7‑149 (MQ=255)                                                                                                                                                    aAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCGGGGCATGGCCGTCGGc  <  3:184133‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ACGTCGGCTTTATCGGGCTGTGGCAGGGCGAAGTAGTGCAGGGAGTGCAGCATCGGTTGCTGGCCAGGGAAGAACTGGTGGCGGTGTTGCCGTTGGGGCATCGCCTGGCGGGCAGGGCACAGCTGGCGCTGGCTGACCTGGCAGGCGAAGTGTTGGTGGACTTCCCCGAAGGCACCGGGGCGCGACGACAGACTGACGAGGCGTTTCAGGCGGTGGGGTTGCAGCGCAGGGTGCAGTTCGAGATCGGGCATGTTCGTCTGGTGGAGAAATTCGTGCAGCGGGGCATGGCCGTCGGC  >  NC_002947/2075909‑2076204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.