New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2299637 = | 45 (0.830) | 3 (0.060) | 3/250 | NT | 6.0% | coding (485/3645 nt) | sbcC | exonuclease subunit SbcC |
? | NC_002947 | 2299677 = | 50 (0.960) | coding (445/3645 nt) | sbcC | exonuclease subunit SbcC |
TGTAGATCGCGGTGTTGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGA > NC_002947/2299530‑2299823 | caaccgcgcccgcgacaaggccaacggcaaactgcagcacagccgtcaaagcttctacgacctcgacagcgagcaagtgctcggcagtagcaagaacgaatacaagcAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGc > 6:59341‑M1/108‑149 (MQ=255) aGATCGCGGTGTTGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTg > 4:234575/1‑149 (MQ=255) gcgGTGTTGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTc > 3:56557/1‑149 (MQ=255) gtgtTGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGtt < 4:306770/149‑1 (MQ=255) ttGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCt < 2:335352/148‑1 (MQ=255) ttGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCt < 3:234575/148‑1 (MQ=255) tGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCa > 6:233775/1‑149 (MQ=255) atttCCAGAAACTCGCTACGGTCATTGACCTCCGCCTTGAGGAACGAGCCGAACTCGCTCTGGGCCAGAATCACCTAACGGGTGAACTGTTCGAAGTTCAGGCCCATACGGCCTTCGACCACATGCTAGTATTCGTTCTTGCCACAGcc > 4:162517/2‑149 (MQ=255) ttCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTc < 1:18084/132‑1 (MQ=255) ttCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTc > 2:18084/1‑132 (MQ=255) aGCAACTCGCTAGGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCAc < 3:162517/149‑1 (MQ=255) gCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACt > 6:94251/1‑149 (MQ=255) cAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACtt > 8:159682/1‑149 (MQ=255) aCTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGc > 3:102327/1‑149 (MQ=255) tACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTg > 4:130973/1‑149 (MQ=255) cGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTc < 3:130973/149‑1 (MQ=255) tCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAg < 7:159682/149‑1 (MQ=255) tttGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGt > 1:211342/1‑149 (MQ=255) cTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCttt > 5:109612/1‑149 (MQ=255) ttGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCttt > 2:101483/1‑148 (MQ=255) tGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGa > 1:151055/1‑149 (MQ=255) gAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTg < 4:102327/147‑1 (MQ=255) gAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGa < 5:233775/148‑1 (MQ=255) ggAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACgg > 3:50905/1‑149 (MQ=255) cgcCGAACTCTCTCTGGGCCAGCATCACCGGACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGtgc < 8:250595/149‑1 (MQ=255) gcCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGtgct > 4:131130/1‑149 (MQ=255) gAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCa < 4:56557/149‑1 (MQ=255) gAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGAGCTGCa < 2:211342/149‑1 (MQ=255) tCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCAc > 6:153758/1‑101 (MQ=255) tCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCAc < 5:153758/101‑1 (MQ=255) cGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTg > 8:121988/1‑149 (MQ=255) ctctGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGcc < 6:109612/149‑1 (MQ=255) ctctGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGcc > 4:39071/1‑149 (MQ=255) ggCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGt < 3:131130/146‑1 (MQ=255) gCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGc < 1:101483/149‑1 (MQ=255) ccAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGcc > 1:34726/1‑149 (MQ=255) aGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCtt < 7:121988/149‑1 (MQ=255) cATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGt > 6:133643/1‑149 (MQ=255) gCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGgc > 2:110090/1‑149 (MQ=255) cACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGgcg < 5:94251/149‑1 (MQ=255) gTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGtt < 3:39071/149‑1 (MQ=255) gcaactggtcgaagcccgtctgggcctgaacttcgaacagttGCTTGTATTCGTTCTTGCTACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTg > 6:59341‑M2/43‑149 (MQ=255) ttCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTg < 2:256903/142‑1 (MQ=255) ttCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTg > 1:256903/1‑142 (MQ=255) ttCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTc < 4:50905/147‑1 (MQ=255) tcgaagcccgtctgggcctgaacttcgaacagttGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCttt > 1:90408‑M2/35‑94 (MQ=255) tcgaagcccgtctgggcctgaacttcgaacagttGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCttt < 2:90408‑M2/60‑1 (MQ=255) gCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGAGCGGTTGGCTTCCCCGCGGGCGCgg > 2:250667/1‑148 (MQ=255) gCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGAAGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCgg > 7:244864/1‑148 (MQ=255) cccAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTTCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTgg > 5:322528/1‑130 (MQ=255) cccAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTgg < 6:322528/130‑1 (MQ=255) ccAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGc < 7:50551/87‑1 (MQ=255) ccAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGc > 8:50551/1‑87 (MQ=255) cAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAgc < 2:151055/149‑1 (MQ=255) gggCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGcggcgg > 1:83374/1‑149 (MQ=255) cGACCAGTTGCTTGTATTCGTTCTTGCGACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGt < 1:202966/135‑1 (MQ=255) cGACCAGATGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTATGACGGCTGTGCTGCAGTATGCCGTTGGCCTTGTCGAGGGCGAGGATGGCTTCCCAGCCGGCGCGGt > 2:202966/1‑135 (MQ=255) cagttGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTcc > 6:336269‑M2/6‑118 (MQ=255) cagttGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTcc < 5:336269‑M2/113‑1 (MQ=255) ttGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGa > 5:23518‑M2/3‑149 (MQ=255) | TGTAGATCGCGGTGTTGGTGAGCTTTTCCAGCAACTCGCTACGGTCTTTGTCGTCGGCCTTGAGGAACGCGCCGAACTCGCTCTGGGCCAGCATCACCGCACGGGTGAACTGTTCGAAGTTCAGGCCCAGACGGGCTTCGACCAGTTGCTTGTATTCGTTCTTGCCACTGCCGAGCACTTGCTCGCTGTCGAGGTCGTAGAAGCTTTGACGGCTGTGCTGCAGTTTGCCGTTGGCCTTGTCGCGGGCGCGGTTGGCTTCCCAGCGGGCGCGGTAGCGGCGGCCGTCGATGCCGA > NC_002947/2299530‑2299823 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |