New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2307870	45 (0.830)	3 (0.060)	3/252	NT	6.4%	coding (247/495 nt)	PP_2030	hypothetical protein
	?	NC_002947	= 2307899	44 (0.840)					coding (218/495 nt)	PP_2030	hypothetical protein

TTATCCAGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCCAGCAGCAGCCACCAGC  >  NC_002947/2307758‑2308046                                                                                                                                              |                                                                                                                                                    ttATCCAGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGc                                                                                                                                              >  1:120893/1‑149 (MQ=255)    tCCAGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGGGGCAGGCGGGCCa                                                                                                                                            <  3:179624/148‑1 (MQ=255)     ccAGAAAGGCCGGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGc                                                                                                                                          >  5:89777/1‑149 (MQ=255)       aGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTc                                                                                                                                        >  1:144386/1‑149 (MQ=255)       aGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTc                                                                                                                                        >  1:264762/1‑149 (MQ=255)       aGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTc                                                                                                                                        >  6:164730/1‑149 (MQ=255)        gAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCg                                                                                                                                       >  2:101595/1‑149 (MQ=255)             gccagccaCTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCaa                                                                                                                                  <  2:120893/149‑1 (MQ=255)               cagccaCTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGc                                                                                                                                     <  6:269994/144‑1 (MQ=255)               cagccaCTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGc                                                                                                                                     >  5:269994/1‑144 (MQ=255)               cagccaCTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAgg                                                                                                                                >  6:221269/1‑149 (MQ=255)                        gcgGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAgg                                                                                                                        <  8:195895/148‑1 (MQ=255)                        gcgGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGgc                                                                                                                       >  7:100688/1‑149 (MQ=255)                        gcgGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGgc                                                                                                                       >  7:95930/1‑149 (MQ=255)                            ccGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCAc                                                                                                                   <  2:264762/149‑1 (MQ=255)                                   gggTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGc                                                                                                                                              >  7:210853/1‑115 (MQ=255)                                   gggTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGc                                                                                                                                              <  8:210853/115‑1 (MQ=255)                                   gggTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTc                                                                                                             >  6:352193/1‑148 (MQ=255)                                       gtgGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAggg                                                                                                        >  6:242040/1‑149 (MQ=255)                                       gtgGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAggg                                                                                                        <  5:221269/149‑1 (MQ=255)                                        tgGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAgg                                                                                                                                                   >  6:145538‑M2/1‑103 (MQ=255)                                        tgGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAgg                                                                                                                                                   <  5:145538‑M2/105‑3 (MQ=255)                                             gTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGgttgtt                                                                                                  >  3:279616/1‑149 (MQ=255)                                                      tGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCa                                                                                         >  1:210865/1‑149 (MQ=255)                                                        ggTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCAc                                                                                        >  6:157023/1‑148 (MQ=255)                                                          tAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGAGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGAt                                                                                     >  8:34027/1‑149 (MQ=255)                                                           aGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATg                                                                                    >  5:165128/1‑149 (MQ=255)                                                            gTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATgc                                                                                   <  2:210865/149‑1 (MQ=255)                                                            gTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATgc                                                                                   >  3:96821/1‑149 (MQ=255)                                                             tGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGcc                                                                                                                                    <  1:257655/99‑1 (MQ=255)                                                             tGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGcc                                                                                                                                    >  2:257655/1‑99 (MQ=255)                                                             tGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATgcg                                                                                  <  5:164730/149‑1 (MQ=255)                                                             tGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCCTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATgcg                                                                                  >  4:112883/1‑149 (MQ=255)                                                                   cGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGttt                                                                            <  1:101595/149‑1 (MQ=255)                                                                   cGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGtt                                                                             <  5:157023/148‑1 (MQ=255)                                                                      cacaGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGcc                                                                         >  6:134894/1‑149 (MQ=255)                                                                                   gCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAgcgg                                                            >  6:269033/1‑149 (MQ=255)                                                                                    cAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAgcggc                                                           <  2:144386/149‑1 (MQ=255)                                                                                          gTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAgcc                                                     <  5:242040/149‑1 (MQ=255)                                                                                             gATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAgccgc                                                   <  4:96821/148‑1 (MQ=255)                                                                                                   ttGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGc                                            >  2:8860/1‑149 (MQ=255)                                                                                                     gCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAggcgcctggctgcaacagctccacgccctgctcaagcgcctgtgccgcacccactacccaggcgcccacagccaccccctcaacggccgcgagtggcgggcctttct                                          <  1:301995‑M2/149‑108 (MQ=255)                                                                                                        gCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAggcgcctggctgcaacagatcaacgccctgctcaagcgcctgtgccgcaaccactacccaggcgccaacagccacaccctcaacggc                                                              >  8:196971‑M2/1‑39 (MQ=255)                                                                                                        gCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAggcgcctggctgcaacagatcaacgccctgctcaagcgcctgtgccgcaaccactacccaggcgccaacagccacaccctcaacggc                                                              <  7:196971‑M2/126‑88 (MQ=255)                                                                                                         ccAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCcccagc                                      <  5:134894/149‑1 (MQ=255)                                                                                                               gccggccgGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGa                                <  6:165128/149‑1 (MQ=255)                                                                                                                ccggccggGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGG‑CCCAGCCCAGGAGt                              <  3:112883/149‑1 (MQ=255)                                                                                                                 ctgccggGGCGCCGTCATACTGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGAGt                              <  7:34027/147‑1 (MQ=255)                                                                                                                                 aTACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCcagca              <  2:147464/149‑1 (MQ=255)                                                                                                                                 aTACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCcagca              >  6:24756/1‑149 (MQ=255)                                                                                                                                    cGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGTCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCcag                >  2:213309/1‑144 (MQ=255)                                                                                                                                    cGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGTCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCcag                <  1:213309/144‑1 (MQ=255)                                                                                                                                    cGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCcagcagca           <  4:279616/149‑1 (MQ=255)                                                                                                                                             cAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCATGCTGAGGCGATTGACCCGGCGCCACCGCGGCGGCCGCCCCACGCCCCAGCCCAGGGGTGGCAGGCCGGCCCCCAGCCGCCCCCCGc  >  1:272105/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                    TTATCCAGAAAGGCCAGCCACTCGCGGCCGTTGAGGGTGTGGCTGTTGGCGCCTGGGTAGTGGTTGCGGCACAGGCGCTTGAGCAGGGCGTTGATCTGTTGCAGCCAGGCGCCGGCCGGGGCGCCGTCATACGGGCGTGGCAGGCGGGCCAGCTCGGCCAAGGCCTCCAGGCGCACCGGGTCCAGGGGTTGTTCGGCGCGCACGATGCGGCGTTTGCCCGGGCGCCAGCGGCGCAGCCGCCACAGGCCCCAGCCCAGGAGTGGCAGGACGGCCAGCAGCAGCCACCAGC  >  NC_002947/2307758‑2308046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.