New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2986678 =	32 (0.590)	5 (0.100)	3/242	NT	13.4%	coding (1721/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2986778 =	35 (0.700)					coding (1621/2991 nt)	PP_2612	membrane protein

TTCAAATACCGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGAACAAG  >  NC_002947/2986636‑2986920                                                                                                                                               |                                                                                                                                               ttCAAATACCGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCACAGGCCAtggct                                                                                                                                             >  6:51649/1‑146 (MQ=255) ttCAAATACCGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCACAGGCCAtggct                                                                                                                                             <  5:51649/146‑1 (MQ=255)  gctcaagcgcctgcgcgggcagacccgatgggatgccagtcATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCATGACTGGCa                                                                                                                                         <  5:262721‑M1/108‑1 (MQ=255)   ctcaagcgcctgcgcgggcagacccgatgggatgccagtcATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCATGACTGGCAt                                                                                                                                        >  6:262721‑M1/41‑149 (MQ=255)   cAAATACCGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCa                                                                                                                                         <  3:283385/148‑1 (MQ=255)      aTACCGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATcc                                                                                                                                      >  3:88925/1‑148 (MQ=255)          cGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCg                                                                                                                                 <  4:149861/149‑1 (MQ=255)            cTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCAtggct                                                                                                                                             >  8:15183/1‑135 (MQ=255)            cTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCAtggct                                                                                                                                             <  7:15183/135‑1 (MQ=255)               cACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCt                                                                                                                            <  7:145890/149‑1 (MQ=255)                     ctGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCcgc                                                                                                                      >  5:124226/1‑149 (MQ=255)                                  atgccagtcatggcctgcggcgacaggtgcagttggcagcgcgtgaggctaatgccgagaaagccctgggattgctggcggcgcgctatcgaatcaccgagcaggccatGACTGGCATCCCATCGGGTCTGCCCGCGCAGGCGCTTGAg                                                                                                         >  6:262721‑M2/110‑149 (MQ=255)                                   tgccagtcatggcctgcggcgacaggtgcagttggcagcgcgtgaggctaatgccgagaaagccctgggattgctggcggcgcgctatcgaatcaccgagcaggccatGACTGGCATCCCATCGGGTCTGCCCGCGCAGGCGCTTGAGc                                                                                                        <  5:262721‑M2/41‑1 (MQ=255)                                        gTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGcaccac                                                                                                   >  4:270888/1‑149 (MQ=255)                                         tAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACg                                                                                                  <  1:158744/149‑1 (MQ=255)                                         tAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACg                                                                                                  >  1:127192/1‑149 (MQ=255)                                            tggcctgcggcggcaggtgcagttggcagcgcgggaggcgaatgccgagaaagcgctggggttgctggcggcgcgctatcgaatcaccgagcaggccatGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGCGCACCACGGTa                                                                                               >  3:185375‑M2/100‑149 (MQ=255)                                              gcctgcggcggcaggtgcagttggcagcgcgggaggcgaatgccgagaaagcgctggggttgctggcggcgcgctatcgaatcaccgagcaggccatGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTAtt                                                                                             >  5:329291‑M2/98‑149 (MQ=255)                                                              gATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGt                                                                              <  6:124226/148‑1 (MQ=255)                                                                tAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAg                                                                           <  3:270888/149‑1 (MQ=255)                                                                      gccgccAGCAACCCCAGCGGGTTCTCTGCATTCGCCTCCGGGGCTGCCAACTGCCCATGCCGACGCAGGCCATGGCTGGCATCCCATGGGGTCTGCCCGCGCAGTCTCTGGATCACCACTGTATTGACCGTCTGGGCGGTGAGTTCGGt                                                                     <  2:203697/149‑1 (MQ=255)                                                                      gccgccAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGt                                                                     <  3:323914/149‑1 (MQ=255)                                                                        cgccAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCa                                                                                                                   >  8:169892/1‑101 (MQ=255)                                                                        cgccAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCa                                                                                                                   <  7:169892/101‑1 (MQ=255)                                                                        cgccAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGa                                                                   >  5:112611/1‑149 (MQ=255)                                                                         cgcgggaggcgaatgccgagaaagcgctggggttgctggcggcgcgctatcgaatcaccgagcaggccatGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGat                                                                  <  6:329291‑M2/79‑1 (MQ=255)                                                                             gCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATcc                                                              >  3:112330/1‑149 (MQ=255)                                                                                 ccccAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTg                                                                    <  8:10983/139‑1 (MQ=255)                                                                                 ccccAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTg                                                                    >  7:10983/1‑139 (MQ=255)                                                                                  cccAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGGCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCAt                                                         <  4:88925/149‑1 (MQ=255)                                                                                    cAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCgg                                                                      <  1:248119/134‑1 (MQ=255)                                                                                    cAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCgg                                                                      >  2:248119/1‑134 (MQ=255)                                                                                    cAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATgg                                                       >  3:192233/1‑149 (MQ=255)                                                                                       cgcTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCg                                                    <  1:160168/149‑1 (MQ=255)                                                                                             ctcGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGa                                                                   <  3:175363/128‑1 (MQ=255)                                                                                             ctcGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGa                                                                   >  4:175363/1‑128 (MQ=255)                                                                                              tcGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGc                                              >  5:137185/1‑148 (MQ=255)                                                                                              tcGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGc                                              >  6:251160/1‑148 (MQ=255)                                                                                                ggCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGAc                                           <  2:279670/149‑1 (MQ=255)                                                                                                       gCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAg                                    >  5:94886/1‑149 (MQ=255)                                                                                                        ccTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGCCCGGCGAGc                                   >  7:290358/1‑149 (MQ=255)                                                                                                              gcgcTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTc                              >  5:298711/1‑148 (MQ=255)                                                                                                                       aCTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTg                    <  4:192233/149‑1 (MQ=255)                                                                                                                            aCCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCt               <  6:112611/149‑1 (MQ=255)                                                                                                                            aCCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCt               >  4:243482/1‑149 (MQ=255)                                                                                                                              cTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTgg             >  5:94478/1‑149 (MQ=255)                                                                                                                                   gccgcAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGcc         >  4:40167/1‑148 (MQ=255)                                                                                                                                         ggccatGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGAACAAg  <  3:243482‑M2/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                               TTCAAATACCGCTGCACCTCCTGGCTAAAGGGATTTTCCGTAATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGCGCTTTCTCGGCATTCGCCTCCCGCGCTGCCAACTGCACCTGCCGCCGCAGGCCATGGCTGGCATCCCATCGGGTCTGCCCGCGCAGTCGCTTGAGCACCACGGTATTGACCGACTGGGCGGTGAGGTCGGTGATATCCGCCATGGCCGGGAAGCGACCGGCGAGCCCTTCGATCACGTTGTCGCTGGCGCCGAACAAG  >  NC_002947/2986636‑2986920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.