New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3860856	60 (1.110)	5 (0.100)	4/246	NT	8.0%	coding (407/615 nt)	PP_3412	LuxR family transcriptional regulator
	?	NC_002947	= 3860878	58 (1.130)					coding (429/615 nt)	PP_3412	LuxR family transcriptional regulator

CGGGATAGGTGCCTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGTCACTGGTGG  >  NC_002947/3860734‑3861026                                                                                                                                                 |                                                                                                                                                     cGGGATAGGTGCCTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctct                                                                                                                                                  <  5:206919‑M2/149‑5 (MQ=255)     atgatacggccccggtaggtgctgatggtcttggcgctgaggttcatgcaagtgccgatgttcttgttgttctcgccgcgcgcgaggcgccgcagcacttccatttctcggtTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCaa                                                                                                                                              >  5:104460‑M1/113‑149 (MQ=255)     aTAGGTGCCTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCaa                                                                                                                                              <  7:29606/149‑1 (MQ=255)         gagCCTTAGTCACCAAGGAAGAGGACCACGAGGCACTTCTAATAGACCTCAAGGCAATGACCAAAGGTTATTCGAACTTTACGCAAATTTACGTCAAAAGCAAATCGCTGGAGAGCGAGCCAGTGCCGCAGGGCAGTCTCTCCaccgca                                                                                                                                          >  8:254560/3‑144 (MQ=255)         gTGCCTTCGACACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGATATTCGACCTTTCCGCAATTGTCCGACAACAGCAACTCGATGAAGAGCGCGCCAGTGCGCCTGGACAGTCTCTCCAAcc                                                                                                                                            >  1:287809/1‑147 (MQ=255)            ccTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCgaga                                                                                                                                        >  1:97288/1‑148 (MQ=255)             cTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctctc                                                                                                                                                 >  4:263009‑M2/1‑133 (MQ=255)             cTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctctc                                                                                                                                                 <  3:263009‑M2/138‑6 (MQ=255)             cTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGaaa                                                                                                                                      <  1:43401/149‑1 (MQ=255)              ttCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAAt                                                                                                                                     >  3:133975/1‑149 (MQ=255)              ttCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAAt                                                                                                                                     >  6:81212/1‑149 (MQ=255)                 gTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCga                                                                                                                                          >  3:4486/1‑141 (MQ=255)                 gTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCga                                                                                                                                          <  4:4486/141‑1 (MQ=255)                  tCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGaa                                                                                                                                 <  2:331639/149‑1 (MQ=255)                      cAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTCGCCAGTCTCTCCAACCGAGAAATGGAAGtgc                                                                                                                             >  2:322930/1‑149 (MQ=255)                      cAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCCGGCCAGTCTCTCCAACCGAGAAATGGAAGtgc                                                                                                                             >  4:4333/1‑149 (MQ=255)                        aGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGtgctg                                                                                                                           >  3:82751/1‑149 (MQ=255)                            gatggtcttggcgctgaggttcatgcaagtgccgatgttcttgttgttctcgccgcgcgcgaggcgccgcagcacttccatttctcggtTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAAc                                                                                                                                             >  8:301268‑M1/90‑127 (MQ=255)                            gatggtcttggcgctgaggttcatgcaagtgccgatgttcttgttgttctcgccgcgcgcgaggcgccgcagcacttccatttctcggtTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAAc                                                                                                                                             <  7:301268‑M1/38‑1 (MQ=255)                            agagGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTgcggc                                                                                                                       >  7:180881/1‑149 (MQ=255)                                gACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCt                                                                                                                   >  3:231531/1‑149 (MQ=255)                                gACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCt                                                                                                                   >  3:321484/1‑149 (MQ=255)                                 aCCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCTGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTc                                                                                                                  >  1:69589/1‑149 (MQ=255)                                 aCCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTc                                                                                                                  <  2:97288/149‑1 (MQ=255)                                  ccACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGtgctgc                                                                                                                          <  6:192475/140‑1 (MQ=255)                                  ccACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGtgctgc                                                                                                                          >  5:192475/1‑140 (MQ=255)                                    aCGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATATCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTcgcg                                                                                                               <  6:139513/149‑1 (MQ=255)                                     cGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTcgcgc                                                                                                              <  4:231531/149‑1 (MQ=255)                                          cccTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCgcggc                                                                                                         <  4:82751/149‑1 (MQ=255)                                            ctgctgTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCgcggc                                                                                                         >  5:142824/1‑147 (MQ=255)                                               ctgTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGaa                                                                                                    <  6:206919/149‑1 (MQ=255)                                               ctgTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGaa                                                                                                    <  8:180881/149‑1 (MQ=255)                                                  ttCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGaacaa                                                                                                 >  8:173142/1‑149 (MQ=255)                                                   tCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGaacaa                                                                                                 >  6:310906/1‑148 (MQ=255)                                                     gCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGaacaac                                                                                                >  4:245331/1‑147 (MQ=255)                                                     gCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAAcaacaa                                                                                              <  7:173142/149‑1 (MQ=255)                                                        cTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGa                                                                                            >  8:324282/1‑148 (MQ=255)                                                           aaGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACAt                                                                                        <  4:133975/149‑1 (MQ=255)                                                             ggCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCgcggc                                                                                                         >  3:256849/1‑130 (MQ=255)                                                             ggCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCgcggc                                                                                                         <  4:256849/130‑1 (MQ=255)                                                                ccTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCCGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCa                                                                                   <  3:4333/149‑1 (MQ=255)                                                                 ttcttgttgttctcgccgcgcgcgaggcgccgcagcacttccatttctcggtTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAAc                                                                                                                                             <  1:310429‑M1/38‑1 (MQ=255)                                                                 ttcttgttgttctcgccgcgcgcgaggcgccgcagcacttccatttctcggtTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAAc                                                                                                                                             >  2:310429‑M1/53‑90 (MQ=255)                                                                      cAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCa                                                                             >  3:180309/1‑149 (MQ=255)                                                                      cAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCa                                                                             <  6:324995/149‑1 (MQ=255)                                                                      cAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCa                                                                             <  5:328380/149‑1 (MQ=255)                                                                      cAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCa                                                                             <  3:245331/149‑1 (MQ=255)                                                                      cAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTACAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCa                                                                             >  7:214422/1‑149 (MQ=255)                                                                        aaGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATg                                                                           <  4:180309/149‑1 (MQ=255)                                                                          ggTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGaa                                                                         <  5:312781/149‑1 (MQ=255)                                                                               ttCGACCTTTCCGCAAATGTCGGTCAACAGCATCTCGCTGGAGAGGGAGCCAGTGCGCCTGGCCAGTCTCTGCTACCGAGAAATGGATGTGCTGCGGCGCCTCGCGCGCGGCGAGAAGTACAAGTACATCGGCTCTTGCATGAACCtga                                                                    <  2:287809/149‑3 (MQ=255)                                                                                  gACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAgcg                                                                 >  3:241214/1‑149 (MQ=255)                                                                                       ttCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGcc                                                               >  3:259125/1‑146 (MQ=255)                                                                                        tCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCaa                                                             <  7:324282/147‑1 (MQ=255)                                                                                           gCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGAcc                                                         >  4:205267/1‑148 (MQ=255)                                                                                                 gTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCa                                                  >  7:8165/1‑149 (MQ=255)                                                                                                        aaCAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCg                                           >  2:80722/1‑149 (MQ=255)                                                                                                        aaCAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCg                                           >  6:122004/1‑149 (MQ=255)                                                                                                         aCAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCgg                                          <  4:321484/149‑1 (MQ=255)                                                                                                         aCAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCgg                                          <  1:80722/149‑1 (MQ=255)                                                                                                          cAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGgcgc                                                                                                                     <  3:283333/73‑1 (MQ=255)                                                                                                          cAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGgcgc                                                                                                                     >  4:283333/1‑73 (MQ=255)                                                                                                             cAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGcc                                      >  4:169249/1‑149 (MQ=255)                                                                                                               aCTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAAc                                                                        >  6:110235/1‑113 (MQ=255)                                                                                                               aCTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAAc                                                                        <  5:110235/113‑1 (MQ=255)                                                                                                                 tCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctctccagcgagttgctgttgaccgacatttgcggaaaggtcgaataacctttggtcagggccttgagggcgcacagcagggcctcgtggtcctcttccttggtgacgaaggcacc                                  <  8:48664‑M2/149‑117 (MQ=255)                                                                                                                   gCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctctccagcgagttgctgttgaccgacatttgcggaaaggtcgaataacctttggtcagggccttgagggcgaacagcagggcctcgtggtcctcttccttggtgacgaaggcaccta                                <  7:99731‑M2/149‑119 (MQ=255)                                                                                                                   gCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctctccagcgagttgctgttgaccgacatttgcggaaaggtcgaataacctttggtcagggccttgagggcgaacagcagggcctcgtggtcctcttc                                                    >  3:70685‑M2/1‑31 (MQ=255)                                                                                                                   gCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTctctccagcgagttgctgttgaccgacatttgcggaaaggtcgaataacctttggtcagggccttgagggcgaacagcagggcctcgtggtcctcttc                                                    <  4:70685‑M2/129‑99 (MQ=255)                                                                                                                   gCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATc                                 <  8:214422/148‑1 (MQ=255)                                                                                                                    cTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCAt                               <  2:69589/149‑1 (MQ=255)                                                                                                                       GAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATgg                             >  3:205267‑M1/1‑148 (MQ=255)                                                                                                                       GAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATgg                             >  5:81212‑M1/1‑148 (MQ=255)                                                                                                                           GCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAg                        >  1:54893‑M1/1‑149 (MQ=255)                                                                                                                               gcCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCa                    <  6:142824/149‑1 (MQ=255)                                                                                                                                   gTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGAc                <  4:241214/149‑1 (MQ=255)                                                                                                                                   gTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCCCCGCGAGAACAACAAGAACATAGGCACTTGCATGAACCTAAGCGCAAACACCATCAGCACCTACCGCGGCCGTATCATGGAAAAGCTCAAGAc                >  5:346109/1‑149 (MQ=255)                                                                                                                                         cTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGGACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGt           >  5:298137/1‑148 (MQ=255)                                                                                                                                            gCCAGTctctccagcgagttgctgttgaccgacatttgcggaaaggtcgaataacctttggtcagggccttgagggcgcacagcagggcctcgtggtcctcttccttggtgacgaaggcacctatcccggcatccaggcagcgacgca        >  7:48664‑M2/1‑6 (MQ=255)                                                                                                                                             ccAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGTCACtg      >  4:122188/1‑149 (MQ=255)                                                                                                                                               aGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCTAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGTCACtggt    <  1:322930/149‑1 (MQ=255)                                                                                                                                                 tctctcCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCATCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGTCACtggtg   >  4:211900/1‑148 (MQ=255)                                                                                                                                                 tctctcCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGTCACtggtgg  <  1:35810/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     CGGGATAGGTGCCTTCGTCACCAAGGAAGAGGACCACGAGGCCCTGCTGTTCGCCCTCAAGGCCCTGACCAAAGGTTATTCGACCTTTCCGCAAATGTCGGTCAACAGCAACTCGCTGGAGAGCGAGCCAGTGCGCCTGGCCAGTCTCTCCAACCGAGAAATGGAAGTGCTGCGGCGCCTCGCGCGCGGCGAGAACAACAAGAACATCGGCACTTGCATGAACCTCAGCGCCAAGACCATCAGCACCTACCGGGGCCGTATCATGGAAAAGCTCAAGACCGAGTCACTGGTGG  >  NC_002947/3860734‑3861026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.