New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3962988	40 (0.740)	5 (0.100)	5/238	NT	11.3%	intergenic (+34/+83)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator
	?	NC_002947	= 3963028	42 (0.850)					intergenic (+74/+43)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator

TGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGCGTCC  >  NC_002947/3962891‑3963173                                                                                                                                          |                                                                                                                                                  tGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcc                                                                                                                                         >  3:75506‑M2/1‑138 (MQ=255) tGAAGGGTCGAGCGAGATCCAGCGGATGCGGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcc                                                                                                                                         >  4:299674‑M2/1‑138 (MQ=255)  gAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcc                                                                                                                                         <  8:151042‑M2/147‑11 (MQ=255)  gAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcc                                                                                                                                         >  7:151042‑M2/1‑137 (MQ=255)        tCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGaa                                                                                                                                 <  2:346071/149‑1 (MQ=255)             cgagATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCa                                                                                                                            <  1:209566/149‑1 (MQ=255)              gagaTCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCcaca                                                                                                                                     <  5:88914/139‑1 (MQ=255)              gagaTCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCcaca                                                                                                                                     >  6:88914/1‑139 (MQ=255)                   ccAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGa                                                                                                                                  >  6:214541/1‑137 (MQ=255)                   ccAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGa                                                                                                                                  <  5:214541/137‑1 (MQ=255)                    cAGCGGATGCTGATTGCGCGGGAATTGAAAACCTATCCGCTGTAACGCAAAGGCATCGCGGTTTTTGGGGGAGCGGGCGACGCGGGTGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCgg                                                                                                                      <  7:179391/148‑1 (MQ=255)                       cGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGAAACGCAAAGGCAACGCGGTTTTTGGGTGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCaaa                                                                                                                  <  7:121902/149‑1 (MQ=255)                              tGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCg                                                                                                           >  6:325171/1‑149 (MQ=255)                               gATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGc                                                                                                          >  5:264847/1‑149 (MQ=255)                                aTTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGCGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGc                                                                                                          <  5:280560/148‑1 (MQ=255)                                     gcgGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAgc                                                                                                    >  5:240573/1‑149 (MQ=255)                                      cgGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAgcg                                                                                                   <  6:240573/149‑1 (MQ=255)                                       gggAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAg                                                                                                                                    <  7:150896/115‑1 (MQ=255)                                       gggAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAg                                                                                                                                    >  8:150896/1‑115 (MQ=255)                                        ggAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAgcgc                                                                                                  >  8:29840/1‑148 (MQ=255)                                          aaTTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCaa                                                                                               <  5:135577/149‑1 (MQ=255)                                           aTTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCaa                                                                                               >  6:284148/1‑148 (MQ=255)                                           aTTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCaa                                                                                               >  6:205693/1‑148 (MQ=255)                                                     tATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGcat                                                                                     >  7:44633/1‑148 (MQ=255)                                                                  gCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTg                                                                       >  5:226242/1‑149 (MQ=255)                                                                    aaaGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTgg                                                                      >  3:161950/1‑148 (MQ=255)                                                                    aaaGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGc                                                                     <  5:284148/149‑1 (MQ=255)                                                                         cAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACGGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGcc                                                                >  6:304274/1‑149 (MQ=255)                                                                           aCGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACGGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGcccc                                                              <  5:304274/149‑1 (MQ=255)                                                                              cgGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcccccaaaaaccgcgttgcctttgcgttacagcggatagtttttcaattcccgcgcaatcagcatccgctgga                                                                  <  1:68749‑M2/142‑82 (MQ=255)                                                                              cgGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcccccaaaaaccgcgttgcctttgcgttacagcggatagtttttcaattcccgcgcaatcagcatccgctgga                                                                  >  2:68749‑M2/1‑61 (MQ=255)                                                                                    ttGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcccacaaaaaccgcgttgcctttgcgttacagcggatagattttcaattcccgcgcaatcagcatccgctggatctcgctcgaccc                                                     <  3:217504‑M2/149‑95 (MQ=255)                                                                                       ggggAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGcc                                                  >  8:277697/1‑149 (MQ=255)                                                                                          gAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCgg                                                >  2:87350/1‑148 (MQ=255)                                                                                            gCGGGTGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGGGcgcccgctcccccaaaaaccgcgttgcctttgcgttacagcggatagtttttcaattcccgcgcaatcagcatccgctggatctcgctcgacccttca                                                 <  1:245989‑M2/145‑99 (MQ=255)                                                                                              gggCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGtt                                           >  7:140301/1‑149 (MQ=255)                                                                                                  gACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGTGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTc                                       >  5:300299/1‑149 (MQ=255)                                                                                                  gACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTc                                       >  3:40023/1‑149 (MQ=255)                                                                                                       ggTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGa                                  <  4:161950/149‑1 (MQ=255)                                                                                                        gTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAg                                 <  5:325171/149‑1 (MQ=255)                                                                                                        gTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAg                                 <  7:277697/149‑1 (MQ=255)                                                                                                         tGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAgg                                <  6:226242/149‑1 (MQ=255)                                                                                                           gAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGcgcccgctcccccaaaaaccgcgttgcctttgcgttacagcggatagtttttcaattcccgcgcaatcagcatccgctggatctcgctcgacccttcatagatctgggtaatccgc                               >  2:245989‑M2/1‑32 (MQ=255)                                                                                                             gggCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGt                            <  7:29840/149‑1 (MQ=255)                                                                                                               gCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTc                           >  2:188471/1‑148 (MQ=255)                                                                                                                 aCCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCCAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGAt                        >  8:935/1‑149 (MQ=255)                                                                                                                   cGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATc                       >  4:72085/1‑148 (MQ=255)                                                                                                                     gCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAg                    <  1:87350/149‑1 (MQ=255)                                                                                                                       tttGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGt                  <  8:44633/149‑1 (MQ=255)                                                                                                                           ccGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTgcgc              <  1:188471/149‑1 (MQ=255)                                                                                                                           ccGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACAGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTgcg               >  3:319558/1‑148 (MQ=255)                                                                                                                            cGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCa             >  6:287444/1‑149 (MQ=255)                                                                                                                            cGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCa             >  6:251736/1‑149 (MQ=255)                                                                                                                                 ttCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTg        >  4:264678/1‑149 (MQ=255)                                                                                                                                    gcgGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGc      <  7:935/148‑1 (MQ=255)                                                                                                                                      gggCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGCGTc   <  4:40023/149‑1 (MQ=255)                                                                                                                                       ggCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATc                       <  4:320583/128‑1 (MQ=255)                                                                                                                                       ggCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATc                       >  3:320583/1‑128 (MQ=255)                                                                                                                                          gcgcCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGCGTcc  <  7:288321/146‑1 (MQ=255)                                                                                                                                          gcgcCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGCGTc   <  4:142488/145‑1 (MQ=255)                                                                                                                                          gcgcCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGCGTc   >  3:142488/1‑145 (MQ=255)                                                                                                                                          gcgcCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTACTCGATCCAGGTGCGCACCTTGCCATcc  >  8:288321/1‑146 (MQ=255)                                                                                                                                          |                                                                                                                                                  TGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGACGCGGTGGAGGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGAATGTCACCGCGGCAAACTTCTCGCCTCAGCGCCAATACCGCGCATCATCCACCACCCTGGCATGCCCCTCGAACAGCGCCGGCAGTTGCTCCTTGAGGTAGTCGATCCAGGTGCGCACCTTGGCGTCC  >  NC_002947/3962891‑3963173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.