| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4059281 | 39 (0.720) | 3 (0.060) | 3/238 | NT | 6.4% | coding (1618/1638 nt) | pgm | phosphoglucomutase |
| ? | NC_002947 | = 4059323 | 52 (1.050) | coding (1576/1638 nt) | pgm | phosphoglucomutase | |||||
ATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCA > NC_002947/4059181‑4059471 | aTGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGAGCCTCgtcgat < 8:9592‑M2/149‑7 (MQ=255) ggTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCttt < 1:208313/149‑1 (MQ=255) tCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCg < 2:102179/149‑1 (MQ=255) gAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCt > 5:202459/1‑149 (MQ=255) aaTAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTg > 1:318456/1‑146 (MQ=255) tAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCtt > 1:279087/1‑148 (MQ=255) tAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTAcc < 1:64107/149‑1 (MQ=255) aaTTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTAccc > 2:185545/1‑149 (MQ=255) aTCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgc > 3:275175/1‑149 (MQ=255) aTCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgc > 2:36831/1‑149 (MQ=255) tCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGgcg > 7:46334/1‑149 (MQ=255) aGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGaa > 2:18267/1‑149 (MQ=255) ccAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAAc > 3:322000/1‑146 (MQ=255) ccAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCa < 4:322000/148‑1 (MQ=255) cAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGc > 3:30760/1‑149 (MQ=255) aaGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGc > 7:149811/1‑148 (MQ=255) gCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCAt > 6:324532/1‑149 (MQ=255) ggTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTg < 4:275175/149‑1 (MQ=255) gTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTgg < 5:324532/149‑1 (MQ=255) tGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGcc < 7:9592/148‑1 (MQ=255) tGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGcc < 8:46334/148‑1 (MQ=255) ttACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAAc > 2:331415/1‑134 (MQ=255) ttACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAAc < 1:331415/134‑1 (MQ=255) ggTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGt > 5:68043/1‑143 (MQ=255) ggTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGt < 6:68043/143‑1 (MQ=255) gTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGtca < 4:204432/144‑1 (MQ=255) gTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGtca > 3:204432/1‑144 (MQ=255) ggCAATGGCATCATCGACCAGCACTTGTGCTTCCTTCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcag < 8:180472‑M2/149‑90 (MQ=255) gcgaccgcGACCCGCACGTGTCCCTCCTCCCCCAGACGCCGCAACTGCGCCCCGTCGA‑GGAAGCCTTCGGCGCAGATCTCGCAGATCTCTTCAGCACCCGACGCGCGCGCCGCGAACCAGCCATAGGCCGTCATCACCTTAAGCCCGc < 4:30760/141‑1 (MQ=255) gCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGc < 8:149811/148‑1 (MQ=255) cTTCATCGACCAGCACTTGTGCTTCCTTCACCAGACGCTGCAAATGCGCCTCgtcgatgaagtcattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaccctcc > 7:180472‑M2/1‑52 (MQ=255) cTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGcc > 5:326100/1‑148 (MQ=255) ttCATCGACCAGCACTTGTGCTTCCTCCACCAGCCGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCa > 7:75618/1‑148 (MQ=255) ttCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCgtcgatgaagccattgcctgaccggtaacaaaccgcttggttctgtggtgtgatgtaaattagaattaatcttatttactccgccgcaggaacctcct < 2:217675‑M2/149‑99 (MQ=255) ttCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCaa > 7:80248/1‑149 (MQ=255) cATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTTGCCGTCATCACCTTAAGCCCGCCAAt < 1:185545/148‑1 (MQ=255) cATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATc > 3:98766/1‑149 (MQ=255) tCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGc > 6:193165/1‑149 (MQ=255) aCTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCAtt > 7:90596/1‑149 (MQ=255) aCTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCAtt > 1:301481/1‑149 (MQ=255) cTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGAGTGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCg > 1:65927/1‑139 (MQ=255) cTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCg < 2:65927/138‑1 (MQ=255) gtgCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGc < 6:202459/147‑1 (MQ=255) gCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTgg > 3:217934/1‑149 (MQ=255) cTTCCTCCACGAGACGGTCCATAAGCGCCTCGTCGA‑TGTAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACGTTAAGCCCGCCAATCGCCTGGCCATTGCCTggg < 8:80248/149‑1 (MQ=255) cTTCCTCCACCAGACGCTGCAAATGCGCCTCGGCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTggg < 8:75618/149‑1 (MQ=255) cctccACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTgggg < 5:193165/147‑1 (MQ=255) ctccACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGt > 5:33581/1‑149 (MQ=255) ctccACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGt < 2:318456/149‑1 (MQ=255) tccACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGtc < 4:219895/105‑1 (MQ=255) tccACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGtc > 3:219895/1‑105 (MQ=255) gatcaGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGAGTATATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTgg < 4:98766/145‑1 (MQ=255) caGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGa < 2:301481/149‑1 (MQ=255) aGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCg > 7:114805/1‑114 (MQ=255) aGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCg < 8:114805/114‑1 (MQ=255) gACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAgg < 2:279087/149‑1 (MQ=255) tGCGAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTg > 6:239719/1‑149 (MQ=255) cAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCa > 4:4972/1‑149 (MQ=255) gcCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCgg < 1:18267/149‑1 (MQ=255) cgtcgA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCa > 7:298711/1‑149 (MQ=255) | ATGAGGAGGGTCCTGCGGCGGAGTAAATAAGATTAATTCTAATTTACATCACACCACAGAACCAAGCGGTTTGTTACCGGTCAGGCAATGGCTTCATCGACCAGCACTTGTGCTTCCTCCACCAGACGCTGCAAATGCGCCTCGTCGA‑TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCA > NC_002947/4059181‑4059471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |