New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4430826 =	47 (0.870)	4 (0.080)	4/246	NT	7.7%	coding (596/1068 nt)	PP_3925	hypothetical protein
	?	NC_002947	4430872 =	51 (1.000)					coding (642/1068 nt)	PP_3925	hypothetical protein

CGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTACTGGATC  >  NC_002947/4430727‑4431004                                                                                                                                                  |                                                                                                                                     agtgggtcgcccagggtggccatttcccagtccagcacaccgatgatgcgcatggggttgtccgcgtccaggatgacgttgtcgaaccggtagtcgttgTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACaa                                                                                                                                    >  3:95609‑M1/100‑148 (MQ=255) agtgggtcgcccagggtggccatttcccagtccagcacaccgatgatgcgcatggggttgtccgcgtccaggatgacgttgtcgaaccggtagtcgttgTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAAc                                                                                                                                   >  8:140352‑M1/100‑149 (MQ=255)    aGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGAc                                                                                                                                <  1:55837/149‑1 (MQ=255)       gCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTAc                                                                                                                             <  3:221083/149‑1 (MQ=255)        cTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTAcc                                                                                                                            >  4:43181/1‑149 (MQ=255)           cGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGt                                                                                                                         <  7:215520/149‑1 (MQ=255)                   gcCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGAACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAAc                                                                                                                 <  8:248711/149‑1 (MQ=255)                        aTCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGTGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCAt                                                                                                            >  5:322563/1‑149 (MQ=255)                           gAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCt                                                                                                         >  3:214935/1‑149 (MQ=255)                                   gACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCgg                                                                                                 <  2:77601/149‑1 (MQ=255)                                      cAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGAc                                                                                               >  6:311535/1‑148 (MQ=255)                                       aGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACaa                                                                                             <  8:178838/149‑1 (MQ=255)                                              aTGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCAt                                                                                       <  3:43181/148‑1 (MQ=255)                                                gAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATgcg                                                                                    >  2:333573/1‑149 (MQ=255)                                                  aaaaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGca                                                                                  <  3:62977/149‑1 (MQ=255)                                                    aaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGAcgc                                                                                                   <  3:259/130‑1 (MQ=255)                                                    aaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTACACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGcat                                                                                 >  1:118166/1‑148 (MQ=255)                                                    aaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGACGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGAcgc                                                                                                   >  4:259/1‑130 (MQ=255)                                                           gACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACCACGACTTCCGGTTCGCCAACGTCATCCTGGACGCGGGGAACCGCATGCGCATCATCGgtg                                                                         >  6:208826/1‑149 (MQ=255)                                                            acacCGGATGCGCCACGCTTGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGgt                                                                          <  6:155518/147‑1 (MQ=255)                                                            acacCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGgt                                                                          <  1:333573/147‑1 (MQ=255)                                                                cGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGAAAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTg                                                                    >  6:94258/1‑149 (MQ=255)                                                                      cgcCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTgg                                                              <  4:214935/149‑1 (MQ=255)                                                                            gCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCatcatc                                                                             >  5:330357/1‑128 (MQ=255)                                                                            gCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCatcatc                                                                             <  6:330357/128‑1 (MQ=255)                                                                            gCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCatcatc                                                                             <  6:335237/128‑1 (MQ=255)                                                                            gCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCatcatc                                                                             >  5:335237/1‑128 (MQ=255)                                                                            gCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCACATGCGCATCATCGGTGTGCTGGACTGGGAAATg                                                        <  1:195152/149‑1 (MQ=255)                                                                              tGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGc                                                      >  8:256891/1‑149 (MQ=255)                                                                                 gAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGc                                                                      <  5:17574/130‑1 (MQ=255)                                                                                 gAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGc                                                                      >  6:17574/1‑130 (MQ=255)                                                                                  aaaCGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCAcc                                                  >  2:130214/1‑149 (MQ=255)                                                                                           ccGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGAc                                         <  5:311535/149‑1 (MQ=255)                                                                                            cGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGAcc                                        >  7:271528/1‑149 (MQ=255)                                                                                              ccTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATc                                                                                                           >  5:346063/1‑80 (MQ=255)                                                                                              ccTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATc                                                                                                           <  6:346063/80‑1 (MQ=255)                                                                                                gttgtgcacgatgcctgggcgcgggtggtcggccggcattttttcgtgcaCAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACt                                    >  8:140352‑M2/51‑149 (MQ=255)                                                                                                 ttgtgcacgatgcctgggcgcgggtggtcggccggcattttttcgtgcaCAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACt                                    >  3:95609‑M2/50‑148 (MQ=255)                                                                                                     gcacgatgcctgggcgcgggtggtcggccggcattttttcgtgcaCAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATgg                               <  4:95609‑M2/104‑1 (MQ=255)                                                                                                      CACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGa                              <  3:40365‑M1/149‑1 (MQ=255)                                                                                                          AAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGCCACCCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCCCTCATGGACCTg                          <  8:126308‑M1/149‑1 (MQ=255)                                                                                                           aaaaaTGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTgg                         <  8:305521/149‑1 (MQ=255)                                                                                                            aaaaTGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTggg                        >  2:35444/1‑149 (MQ=255)                                                                                                                      ccgACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTgccta              <  4:40365/149‑1 (MQ=255)                                                                                                                      ccgACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTgccta              <  7:256891/149‑1 (MQ=255)                                                                                                                            accCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGTACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGTGCAACTGCCTAGCATAc        <  8:271528/149‑1 (MQ=255)                                                                                                                            accCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTgcctag             <  7:138483/144‑1 (MQ=255)                                                                                                                            accCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTgcctag             >  8:138483/1‑144 (MQ=255)                                                                                                                            accCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTAc        <  6:322563/149‑1 (MQ=255)                                                                                                                             cccGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTACt       <  5:208826/149‑1 (MQ=255)                                                                                                                             cccGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTACt       >  3:119411/1‑149 (MQ=255)                                                                                                                             cccGCGCCCAGGCATCGTGCACAACGACTACCGGTACGACAACGTCATCCTGGCCGCGGACAACCCCAGGCGCATCATCGGTGTGCAGGACAGGGAAATGCCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTCCCTAGCCAACt       >  3:114500/1‑149 (MQ=255)                                                                                                                              ccGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCt                           <  5:309656/128‑1 (MQ=255)                                                                                                                              ccGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCt                           >  6:309656/1‑128 (MQ=255)                                                                                                                                 cggcattttttcgtgcaCAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTACTGGAt   <  7:140352‑M2/132‑1 (MQ=255)                                                                                                                                 cgcCCAGGCATCGTGCACAACGCCTACCGGATCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGAc                             >  1:30245/1‑123 (MQ=255)                                                                                                                                 cgcCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGAc                             <  2:30245/123‑1 (MQ=255)                                                                                                                                  gcCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTACTGGATc  <  1:130214/149‑1 (MQ=255)                                                                                                                                  gcCCAGGCATCGTGCACAACGACTACCGGTACGACAACCACATCCTGGACGCGGACAACCCCATCCGCATCATCGGAGTGCTGCACTGGGAAATCGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTCCCTAGCCTACTGGATc  >  7:170619/1‑149 (MQ=255)                                                                                                                                        gCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTgg                                              <  6:327454/99‑1 (MQ=255)                                                                                                                                        gCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTgg                                              >  5:327454/1‑99 (MQ=255)                                                                                                                                                  |                                                                                                                                     CGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGACCTGGGCAACTGCCTAGCCTACTGGATC  >  NC_002947/4430727‑4431004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.