New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 469997355 (1.020)4 (0.080) 4/248 NT 6.9% coding (715/2655 nt) kdpD sensor protein
?NC_002947 = 4700030 55 (1.070)coding (658/2655 nt) kdpD sensor protein

CGGCTGGCATGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGTCGATCAGCACCAGCTCGAACGCT  >  NC_002947/4699885‑4700178
                                                                                                                                                  |                                                                                                                                                    
cgGCTGGCATGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATggc                                                                                                                                                   >  1:154328‑M2/1‑146 (MQ=255)
    tGGCATGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATg                                                                                                                                                     >  2:101830‑M2/1‑142 (MQ=255)
    tGGCATGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATg                                                                                                                                                     <  1:101830‑M2/143‑2 (MQ=255)
       cATGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTcg                                                                                                                                            >  3:168236/1‑149 (MQ=255)
        aTGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTcgc                                                                                                                                           >  3:64667/1‑149 (MQ=255)
            cgcACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAg                                                                                                                                       <  8:29222/149‑1 (MQ=255)
                 cAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCg                                                                                                                                   >  1:85977/1‑149 (MQ=255)
                     cGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCGGGCTCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAg                                                                                                                              <  6:8247/149‑1 (MQ=255)
                           gCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAggttggt                                                                                                                        <  4:64667/149‑1 (MQ=255)
                              tGGTCGTAACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCAGCGCTGAAGATAGCCGTGGGCAAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTg                                                                                                                     >  8:47512/1‑149 (MQ=255)
                                   gtcACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGaa                                                                                                                 >  3:107063/1‑148 (MQ=255)
                                        cGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATAc                                                                                                           >  6:108311/1‑149 (MQ=255)
                                             aTGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATc                                                                                                      >  5:274898/1‑149 (MQ=255)
                                                 ccacctGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATg                                                                                                  <  8:76682/149‑1 (MQ=255)
                                                 ccaccaGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGaaaaa                                                                                                              <  7:240105/137‑1 (MQ=255)
                                                 ccaccaGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATg                                                                                                  >  7:68453/1‑149 (MQ=255)
                                                  caccaGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATgg                                                                                                 >  4:88332/1‑149 (MQ=255)
                                                   accaGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGgc                                                                                                >  6:246783/1‑149 (MQ=255)
                                                      aGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGgccgc                                                                                             >  3:66117/1‑149 (MQ=255)
                                                       gCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATAc                                                                                                           >  3:43198/1‑134 (MQ=255)
                                                       gCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATAc                                                                                                           <  4:43198/134‑1 (MQ=255)
                                                        cAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGccc                                                                                           <  2:85977/149‑1 (MQ=255)
                                                         aaCCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATg                                                                                                  >  4:201344/1‑141 (MQ=255)
                                                         aaCCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATg                                                                                                  <  3:201344/141‑1 (MQ=255)
                                                         aaCCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCt                                                                                          >  6:69275/1‑149 (MQ=255)
                                                         aaCCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCt                                                                                          >  7:254160/1‑149 (MQ=255)
                                                          aCCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCtt                                                                                         <  5:69275/149‑1 (MQ=255)
                                                            cGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGc                                                                                       <  4:107063/149‑1 (MQ=255)
                                                            cGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGc                                                                                       <  5:108311/149‑1 (MQ=255)
                                                             ggCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGcc                                                                                      >  5:295958/1‑149 (MQ=255)
                                                              gCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCt                                                                                     <  8:68453/149‑1 (MQ=255)
                                                               ccGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTg                                                                                    >  1:74234/1‑149 (MQ=255)
                                                                  cgcAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTc                                                                                 <  3:88332/149‑1 (MQ=255)
                                                                    caaaGGCCGGCGCCGCCGGGCCGCGCTGTCGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGAGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCg                                                                                <  7:308956/147‑1 (MQ=255)
                                                                     cAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCgg                                                                               <  4:66117/149‑1 (MQ=255)
                                                                      aaGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGTGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCggg                                                                              >  5:56788/1‑149 (MQ=255)
                                                                       aGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGc                                                                             <  4:168236/149‑1 (MQ=255)
                                                                        ggCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCa                                                                            >  7:143940/1‑149 (MQ=255)
                                                                             gctcctcctGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTac                                                                       <  8:254160/146‑1 (MQ=255)
                                                                               gcCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTacac                                                                     >  8:246265/1‑149 (MQ=255)
                                                                                      ggCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATggccaggaggcgccggccttgcgcggccggttgctggtgggcatagacggtgacgaccaggccgaacgcctggtgcgccatgccagcc                                                              <  2:50058‑M2/149‑89 (MQ=255)
                                                                                      ggCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACAcc                                                                    >  3:79553/1‑143 (MQ=255)
                                                                                      ggCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACAcc                                                                    <  4:79553/143‑1 (MQ=255)
                                                                                       gCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCt                                                              <  6:84743/148‑1 (MQ=255)
                                                                                        ccGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGt                                                                                                                                 <  4:137347/80‑1 (MQ=255)
                                                                                        ccGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGt                                                                                                                                 >  3:137347/1‑80 (MQ=255)
                                                                                          gcgcTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCTGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCAc                                                          <  6:352634/149‑1 (MQ=255)
                                                                                            gcTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGc                                                        <  6:295958/149‑1 (MQ=255)
                                                                                                       ccGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGccc                                                                                           >  2:28960/1‑103 (MQ=255)
                                                                                                       ccGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGCTTTGCGAAAAATACGCATCGATGGCCGccc                                                                                           <  1:28960/103‑1 (MQ=255)
                                                                                                         gTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGagca                                           <  2:74234/149‑1 (MQ=255)
                                                                                                            ggCCAGGTCGGCATCGACCCGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATa                                                                                                            <  4:4278/81‑1 (MQ=255)
                                                                                                            ggCCAGGTCGGCATCGACCCGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATa                                                                                                            >  3:4278/1‑81 (MQ=255)
                                                                                                             gCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGctc                                       >  8:188047/1‑149 (MQ=255)
                                                                                                                      gCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATgg                                                                                                 >  5:348764/1‑82 (MQ=255)
                                                                                                                      gCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATgg                                                                                                 <  6:348764/82‑1 (MQ=255)
                                                                                                                           gACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGt                         <  6:274898/149‑1 (MQ=255)
                                                                                                                                gAGCAGCGGCGGTCTGCATggccaggaggcgccggccttgcgcggccggttgctggtgggcatagacggtgacgaccaggccgaa                                                                                    <  7:119217‑M2/85‑67 (MQ=255)
                                                                                                                                gAGCAGCGGCGGTCTGCATggccaggaggcgccggccttgcgcggccggttgctggtgggcatagacggtgacgaccaggccgaa                                                                                    >  8:119217‑M2/1‑19 (MQ=255)
                                                                                                                                  gcagcGGCGGTCTGCATggccaggaggcgccggccttgcgcggccggttgctggtgggcatagacggtgacgaccaggccgaacgcctggtgcgccatgccagccgcgtggcccagcgccgccacctgccctggagcctggtgcatgt                   >  1:50058‑M2/1‑17 (MQ=255)
                                                                                                                                  gcagcGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGTCGATCAg                  <  7:246265/149‑1 (MQ=255)
                                                                                                                                     gcggcgGTGTGCCTGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGGGGAAAATACGCCTAGATGGCCGCCCTTTGCTGCTCGGGCACGTACACCATGCCGTCACGCAGGCGGTCGAGCAGGGCTCGCGGAGGCAGGTCGCTCCGCAc               >  6:268407/1‑149 (MQ=255)
                                                                                                                                            tCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGTCGATCAGCACCAGCTc         >  7:55883/1‑148 (MQ=255)
                                                                                                                                             cTGCATGGCCAGCTCGCGAAGGGCGGTGAGGTTGGTTTGCGATAAATACGCATCGATGGCCGCACTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCCGGTCGATCAGCACCAGCTCg        >  6:276247/1‑148 (MQ=255)
                                                                                                                                                cATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGTCGATCAGCACCAGCTCGAAc     <  5:268407/148‑1 (MQ=255)
                                                                                                                                                  tGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGTCGATCAGCACCAGCTCGAACGCt  <  8:143940/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CGGCTGGCATGGCGCACCAGGCGTTCGGCCTGGTCGTCACCGTCTATGCCCACCAGCAACCGGCCGCGCAAGGCCGGCGCCTCCTGGCCGCGCTGACGATAGCCGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGGCAGGTCGATCAGCACCAGCTCGAACGCT  >  NC_002947/4699885‑4700178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.