mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 70 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6137654 | 81 (1.500) | 4 (0.080) | 4/246 | NT | 5.0% | coding (109/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein |
| ? | NC_002947 | = 6137707 | 77 (1.510) | coding (162/1254 nt) | czcC | CzcC family metal RND transporter outer membrane protein | |||||
| * | ? | NC_002947 | 6120586 = | 69 (1.280) | 3 (0.060) | 3/252 | NT | 4.6% | coding (169/1329 nt) | PP_5370 | oxidoreductase‑like protein |
| ? | NC_002947 | 6120642 = | 59 (1.130) | coding (113/1329 nt) | PP_5370 | oxidoreductase‑like protein | |||||
| * | ? | NC_002947 | = 6060701 | 81 (1.500) | 3 (0.060) | 3/246 | NT | 4.1% | coding (219/375 nt) | PP_5312 | hypothetical protein |
| ? | NC_002947 | = 6060738 | 65 (1.270) | coding (182/375 nt) | PP_5312 | hypothetical protein | |||||
| * | ? | NC_002947 | = 6030817 | 70 (1.290) | 3 (0.060) | 3/246 | NT | 4.0% | intergenic (‑32/‑330) | rpmB/dppA‑IV | 50S ribosomal protein L28/dipeptide transport protein |
| ? | NC_002947 | = 6030822 | 76 (1.490) | intergenic (‑37/‑325) | rpmB/dppA‑IV | 50S ribosomal protein L28/dipeptide transport protein | |||||
| * | ? | NC_002947 | 6001621 = | 64 (1.180) | 3 (0.060) | 3/242 | NT | 4.7% | coding (680/1299 nt) | amaA | L‑pipecolate oxidase |
| ? | NC_002947 | 6001678 = | 62 (1.230) | coding (623/1299 nt) | amaA | L‑pipecolate oxidase | |||||
| * | ? | NC_002947 | = 5957578 | 63 (1.160) | 3 (0.060) | 3/250 | NT | 4.5% | coding (982/2856 nt) | cyaA | adenylate cyclase |
| ? | NC_002947 | = 5957612 | 66 (1.270) | coding (1016/2856 nt) | cyaA | adenylate cyclase | |||||
| * | ? | NC_002947 | = 5937362 | 79 (1.460) | 3 (0.060) | 3/248 | NT | 3.8% | coding (879/960 nt) | yhiI | translation‑like protein |
| ? | NC_002947 | = 5937389 | 77 (1.490) | coding (906/960 nt) | yhiI | translation‑like protein | |||||
| * | ? | NC_002947 | = 5892262 | 77 (1.420) | 4 (0.080) | 4/250 | NT | 5.0% | coding (362/831 nt) | PP_5166 | sigma‑54 dependent transcriptional regulator |
| ? | NC_002947 | = 5892287 | 79 (1.520) | coding (337/831 nt) | PP_5166 | sigma‑54 dependent transcriptional regulator | |||||
| * | ? | NC_002947 | 5803097 = | 73 (1.350) | 3 (0.060) | 3/248 | NT | 4.1% | coding (701/1017 nt) | PP_5081 | type IV pili biogenesis protein |
| ? | NC_002947 | 5803154 = | 71 (1.380) | coding (644/1017 nt) | PP_5081 | type IV pili biogenesis protein | |||||
| * | ? | NC_002947 | 5780398 = | 76 (1.410) | 3 (0.060) | 3/250 | NT | 4.0% | coding (702/1794 nt) | cvrA | K(+)/H(+) antiporter NhaP |
| ? | NC_002947 | 5780439 = | 71 (1.370) | coding (743/1794 nt) | cvrA | K(+)/H(+) antiporter NhaP | |||||