New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2051324	46 (0.730)	17 (0.270)	16/272	4.2	27.4%	coding (355/591 nt)	PP_1826	isochorismatase family hydrolase
	?	NC_002947	3826611 =	NA (NA)					intergenic (‑566/+37)	ptxS/PP_3381	2‑ketogluconate utilization repressor/transposase
Rejected: Coverage evenness skew score above cutoff.

ACGCCGTCCTTGAATGCCAGGTCACGGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2051176‑2051324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGC  >  NC_002947/3826611‑3826758                                                                                                                                                                                                                                                                                                           ACGCCGTCCTTGAATGCCAGGTCACGGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTC                                                                                                                                                      >  2:92267/1‑149       TCCTTGAATGCCAGGTCACGGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATC                                                                                                                                                 >  2:322058/1‑148                      TCACGGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACC                                                                                                                                  >  7:280819/1‑148                          GGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATT                                                                                                                              >  8:5196/1‑148                          GGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATT                                                                                                                              <  7:5196/148‑1                               GCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTC                                                                                                                        >  2:198729/1‑149                                       GTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTT                                                                                                                         >  5:384849/1‑140                                       GTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTT                                                                                                                         <  6:384849/140‑1                                        TCTTCTACCAGGGTGCACCGATAACCATAGTCGTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTC                                                                                                               <  8:280819/149‑1                                                       CACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTT                                                                                                >  5:365826/1‑149                                                       CACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTT                                                                                                <  1:198729/149‑1                                                       CACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGT                                                                                                 <  1:322058/148‑1                                                        ACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTT                                                                                                >  1:329884/1‑148                                                                                           GTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCC                                                            <  6:365826/149‑1                                                                                               TGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGA                                                         >  7:193826/1‑148                                                                                                                          AGACGATCAGGTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAA                             >  7:83209/1‑149                                                                                                                                    GTCCAGGTGGCCCAGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCAGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGATTCTGTCTTCGAACTCCTAAAGA                   >  4:63660/1‑149                                                                                                                                                  GCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACAAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACAT      >  1:94731/1‑148                                                                                                                                                   CTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACAT      >  7:271218/1‑147                                                                                                                                                   CTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTC                       <  7:84950/130‑1                                                                                                                                                   CTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTC                       >  8:84950/1‑130                                                                                                                                                   CTCTCATAAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGAAAAGCCCGGACCTGCCGGTATTGGCTTCTGGCTTCGAACTCCTAAATACATTGTTAAACAT      >  5:140847/1‑147                                                                                                                                                    TCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAAATCCTCAAGACCTTGTTCAACATAAt   >  7:321352/1‑148                                                                                                                                                     CTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGC  >  2:280580/1‑149                                                                                                                                                                                                                                                                                                           ACGCCGTCCTTGAATGCCAGGTCACGGGTGGCCGACGCGTCTTCTACCAGGGTGCACCGATAACCATAGTCCTTGGCGCGGCGAACGGTGGTGCTGACGCTGGAATGGCTCATGAAACCACAGACGATCAGGTCCAGGTGGCCCAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2051176‑2051324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGC  >  NC_002947/3826611‑3826758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.