New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 395109744 (0.690)22 (0.350) 20/276 3.4 38.7% intergenic (‑61/+134) PP_3486/PP_3487 cytochrome c/hypothetical protein
?NC_002947 = 3951157 26 (0.410)intergenic (‑121/+74) PP_3486/PP_3487 cytochrome c/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

GAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCTTATCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGC  >  NC_002947/3950954‑3951242
                                                                                                                                               |                                                                                                                                                 
gagaCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTgc                                                                                                                                              >  5:228483/1‑149 (MQ=255)
gagaCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTgc                                                                                                                                              >  8:42886/1‑149 (MQ=255)
 agaCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGGCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATTCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGGGGGAGCGGCCTTGCGTCGCGAAAGGGCTgcg                                                                                                                                             <  3:355954/149‑1 (MQ=255)
  gaCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTgcgc                                                                                                                                            <  5:328205/149‑1 (MQ=255)
   aCGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgca                                                                                                                                           <  3:142715/149‑1 (MQ=255)
    cGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcag                                                                                                                                          <  8:347907/149‑1 (MQ=255)
    cGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcag                                                                                                                                          <  4:294465/149‑1 (MQ=255)
     gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcag                                                                                                                                          >  3:179790/1‑148 (MQ=255)
      cccTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagca                                                                                                                                        <  3:361414/149‑1 (MQ=255)
      cccTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagca                                                                                                                                        <  1:147087/149‑1 (MQ=255)
       ccTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGcagcag                                                                                                                                       >  1:32706/1‑149 (MQ=255)
         tCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGAGCGCgcagcgctc                                                                                                                                     >  3:209952/1‑145 (MQ=255)
             ggTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCgg                                                                                                                                 <  7:42886/149‑1 (MQ=255)
               tAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagc                                                                                                                                         <  1:4559/139‑1 (MQ=255)
               tAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagc                                                                                                                                         >  2:4559/1‑139 (MQ=255)
                 aaGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGt                                                                                                                             <  3:124262/149‑1 (MQ=255)
                  aGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGc                                                                                                                                                 >  7:157426/1‑128 (MQ=255)
                  aGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGc                                                                                                                                                 <  8:157426/128‑1 (MQ=255)
                   ggCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTgg                                                                                                                           >  7:254531/1‑149 (MQ=255)
                          gCCTGCTTGTTCGTGGTCGGTCAGGTCCTGGGCCAGGGCTGAGGGCTAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCTAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTc                                                                                                                     <  4:179790/148‑1 (MQ=255)
                            cTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTTCGTGGCGAAAGGGCTGCGCCGCCGCCCCGGCAGTGGGAGcagaag                                                                                                                  >  1:283132/1‑144 (MQ=255)
                              gCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAgcg                                                                                                                >  6:233247/1‑149 (MQ=255)
                              gCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAgcg                                                                                                                >  6:84572/1‑149 (MQ=255)
                               cTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGACCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAg                                                                                                                        >  2:253203/1‑140 (MQ=255)
                               cTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGACCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAg                                                                                                                        <  1:253203/140‑1 (MQ=255)
                                  gTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCa                                                                                                              <  5:233247/147‑1 (MQ=255)
                                                 ggTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGCAAGGGCTGCGCAGCAGCCCCGGCAGTGGGCGCGCAAGCGCAGAAAGAGGGGAGCGCTg                                                                                             >  5:70183/1‑149 (MQ=255)
                                                 ggTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGAACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTTCGTGGCGAAACGGCTGAGCCCCCGCCCCGGCGGTGGCCGGTGAACGGCAGGAAGGGGGGGGCGCTg                                                                                             >  7:77774/1‑149 (MQ=255)
                                                  gTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgc                                                                                            >  7:4954/1‑149 (MQ=255)
                                                   tCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGCAAGGGCTGCGCCGCCGCCCCCGCACGGGGAGGGCAAGCGCACAAAGAGGGGAGCGCTgcg                                                                                           >  2:267238/1‑149 (MQ=38)
                                                    ccagggccagggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgcgc                                                                                          >  2:159045/1‑149 (MQ=255)
                                                      agggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCACGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgcgcgc                                                                                        <  6:228483/149‑1 (MQ=255)
                                                      agggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgcgcgc                                                                                        <  8:254531/149‑1 (MQ=255)
                                                      agggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCCTCGCGAAAGGGCTGCGCAGCACCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTgcgcgc                                                                                        >  3:95548/1‑149 (MQ=255)
                                                       gggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGct                                                                                       <  1:159045/149‑1 (MQ=255)
                                                        ggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctc                                                                                      <  7:83516/149‑1 (MQ=255)
                                                        ggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctc                                                                                      <  8:4954/149‑1 (MQ=255)
                                                        ggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctc                                                                                      <  5:84572/149‑1 (MQ=255)
                                                         gccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctcc                                                                                     >  6:246712/1‑148 (MQ=255)
                                                               gcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTcgc                                                                               <  5:246712/149‑1 (MQ=255)
                                                                  gAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGAc                                                                            >  4:85817/1‑149 (MQ=255)
                                                                   aGGTCGAAGTTGCCATGCCAAGCACGCAGTGATGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCGCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGTGAGCGCTGCGCGCTCCTTTCGCGAc                                                                            <  5:269967/148‑1 (MQ=38)
                                                                    ggTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGc                                                                          <  3:85817/149‑1 (MQ=255)
                                                                        gAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCATGACTCGCCCAAGGGCAGCGCACCCGCCCCCCCAAGGGCAGCACAAGCGCAGAAAGAGCGGAGCGCTTCGCCCTCCATTAGCGACGCacag                                                                      >  8:100785/1‑146 (MQ=255)
                                                                           gTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCg                                                                   <  2:32706/149‑1 (MQ=255)
                                                                               ccatgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctccttt                                                                                  >  1:230286/1‑126 (MQ=255)
                                                                               ccatgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctccttt                                                                                  <  2:230286/130‑5 (MQ=255)
                                                                                              aGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctcctttc                                                                                 >  8:295271/1‑111 (MQ=255)
                                                                                              aGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctcctttc                                                                                 <  7:295271/116‑6 (MQ=255)
                                                                                                 tAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctccttt                                                                                  <  1:83804/112‑5 (MQ=255)
                                                                                                 tAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGctccttt                                                                                  >  2:83804/1‑108 (MQ=255)
                                                                                                   aGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTcgcg                                                                              >  6:221270/1‑114 (MQ=255)
                                                                                                   aGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTcgcg                                                                              <  5:221270/114‑1 (MQ=255)
                                                                                                     ccATATCGCAAGCCCTGTGGGAGCGGCCATTCGTCGCGAAAGGGCTGAGCCCCACCCCCGGCAGTGGCATCACAAACCCAGAAACAGGGGAGCCCTTACCGCCACAATAGCGACGCAAGGCCGAACCCACAAAAACCGCTGCCACacag                                         >  6:193177/1‑149 (MQ=255)
                                                                                                       atatCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGAGGAGCGCGCAGCGctcccct                                                                                  <  7:229578/106‑5 (MQ=37)
                                                                                                       atatCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGAGGAGCGCGCAGCGctcccct                                                                                  >  8:229578/1‑102 (MQ=37)
                                                                                                                                       cgcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAATGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCac          >  6:351544/1‑146 (MQ=255)
                                                                                                                                       cgcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAATGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCac          <  5:351544/146‑1 (MQ=255)
                                                                                                                                        gcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccgac      >  5:301438/1‑149 (MQ=255)
                                                                                                                                           aatgggCGGGGCCGCAGCCCGGGACGTGGAAGCCCAAGCGCATAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCTACGCATGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCgg   <  7:100785/146‑1 (MQ=255)
                                                                                                                                             ggggCTGCTGCGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTAGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGc  >  1:186990/2‑148 (MQ=255)
                                                                                                                                               |                                                                                                                                                 
GAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCTTATCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGC  >  NC_002947/3950954‑3951242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.