New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 117614 = | 69 (1.080) | 4 (0.070) | 4/238 | NT | 5.6% | coding (471/771 nt) | metQ | methionine ABC transporter substrate‑binding protein |
? | NC_002947 | 117641 = | 71 (1.180) | coding (444/771 nt) | metQ | methionine ABC transporter substrate‑binding protein |
AAGATCAAGAAACTGGACGAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCTTGCTGCTGCTGGACAAGGCTGGCGTGATCAAGCTCAAGGACAA‑CAAGAACATCCTGTCGACCGTGAAGGATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/117766‑117614 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggatgttCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCGGCCGCCGTTGGTGGCGTCGTTGGGGATGACCACGGTGGCGCCGGAGGACAGCTCGTCCAGTTTCTTGATCTTGGTCGAATACACGCCCA > NC_002947/117641‑117783 AAGATCAAGAAACTGGACGAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCTTGCTGCTGCTGGACAAGGCTGGCGTGATCAAGCTCAAGGACAACCAAGAACATCCTGTCGACCGTGAAGG < 1:213274/149‑1 GATCAAGAAACTGGACGAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCTTGCTGCTGCTGGACAAGGCTGGCGTGATCAAGCTCAAGGACAA‑CAAGAACATCCTGTCGACCGTGAAGGATG < 1:326195/149‑1 AGAACATCCTGTCGACCGTGAAGGATGTTCTTGTTGTCCTTGAGCTTGATCACTCCAGCCTTGTCCAGCAGCAGCAAGGCGCGGCCGCCGTTGGTGGCGTCGTTG > 1:106413/1‑105 AGAACATCCTGTCGACCGTGAAGGATGTTCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCGGCCGCCGTTGGTGGCGTCGTTG < 2:106413/105‑1 GAACATCCTGTCGACCGTGAAGGATGTTCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCG < 1:305873/82‑1 GAACATCCTGTCGACCGTGAAGGATGTTCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCG > 2:305873/1‑82 AGGATGTTCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCGGCCGCCGTTGGTGGCGTCGTTGGGGATGACCACGGTGGCGCCGGAGGACAGCTCGTCCAGTTTCTTGATCTTGGTCGAATACACGCC > 7:67688/1‑149 GATGTTCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCGGCCGCCGTTGGTGGCGTCGTTGGGGATGACCACGGTGGCGCCGGAGGACAGCTCGTCCAGTTTCTTGATCTTGGTCGAATACACGCCCA > 7:96508/1‑149 AAGATCAAGAAACTGGACGAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCTTGCTGCTGCTGGACAAGGCTGGCGTGATCAAGCTCAAGGACAA‑CAAGAACATCCTGTCGACCGTGAAGGATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/117766‑117614 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggatgttCTTGTTGTCCTTGAGCTTGATCACGCCAGCCTTGTCCAGCAGCAGCAAGGCGCGGCCGCCGTTGGTGGCGTCGTTGGGGATGACCACGGTGGCGCCGGAGGACAGCTCGTCCAGTTTCTTGATCTTGGTCGAATACACGCCCA > NC_002947/117641‑117783 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |