| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1037793 | 44 (0.690) | 7 (0.130) | 7/208 | NT | 15.0% | intergenic (+38/+78) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| ? | NC_002947 | = 1037825 | 43 (0.820) | intergenic (+70/+46) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase | |||||
GCAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1037626‑1037793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaagcccgctcccaCACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCCCTTCCCGCCTCACCCGCCGCACTTC < NC_002947/1037825‑1037678 GCAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTC > 1:250499/1‑149GCAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTC > 5:353629/1‑149 CAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCG > 6:282488/1‑149 CTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCGTGTGATGACTGTGGCGGCCTCTTCGCGG > 8:264576/1‑149 TGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCTGCTTCGCGGG > 7:116602/1‑149 ACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCA < 6:353629/148‑1 CCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAG < 3:81198/149‑1 CCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGC < 2:250499/149‑1 CCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGC > 2:392428/1‑149 CAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCC > 5:48244/1‑149 TGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGC < 2:52091/117‑1 TGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGC > 1:52091/1‑117 TGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGC < 8:116364/115‑1 TTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCT < 7:390263/148‑1 GAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGATCCCACACGTACAGCGCAAGCCAGAAGGATACG > 1:43357/1‑148 CGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGC < 6:48244/149‑1 GCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGG < 8:116602/149‑1 GTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTT < 2:43357/149‑1 CCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAG‑CAGAAGGCTACGCATTTGGGAGCGGGC < 8:173446/121‑1 CCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAG‑CAGAAGGCTAAGCATTTGGGAGAGGGC > 7:173446/1‑121 TTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCCCAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCC > 1:168148/1‑145 TCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAA < 7:2344/109‑1 TCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAA > 8:2344/1‑109 CAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCCCTTCCCGCCTCA > 1:324762/1‑149 CCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCCCTTCCCGCCTCACCAGCCGCACT < 3:79261/149‑1 CACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCCCTTCCCGCCTCACCCGCCGCACTT > 2:57720/1‑149 ACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCCCTTCCCGCCTCACCCGCCGCACTTC > 7:104818/1‑149 GCAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGC‑AGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1037626‑1037793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcaagcccgctcccaCACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTCATCACAGGACTCTCTCGAACTGCTCCGGCCAGTCCCGCCAGGTAAACACCTGCCCTTCCCGCCTCACCCGCCGCACTTC < NC_002947/1037825‑1037678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |