New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1811611	48 (0.750)	5 (0.080)	5/244	NT	9.2%	coding (807/897 nt)	PP_1615	LysR family transcriptional regulator
	?	NC_002947	= 1811657	53 (0.860)					coding (761/897 nt)	PP_1615	LysR family transcriptional regulator

TTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCTCTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1811484‑1811611 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTCGGCTGACGGGATGTGC  <  NC_002947/1811657‑1811511                                                                                                                                                                                                                                                                                     TTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCTCTGCTGCTGGAGGCGCACCAACCGCCG                                                                                                                                 >  5:141645/1‑148              GGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCT‑‑‑CTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGG                                                                                                                 <  7:225303/148‑1                 CAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCTCTGCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGC                                                                                                                >  2:243/1‑149                 CAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCTCTGCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGC                                                                                                                <  6:141645/149‑1                                   CCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCTCTGCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGA                                                                                               <  1:243/148‑1                                                                                                                            GCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTCGGCTGACGGGATG     >  3:50035/1‑149                                                                                                                            GCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTCGGCTGACGGGATG     >  4:113389/1‑149                                                                                                                            GCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTCGGCTGACGGGAT      <  5:166079/148‑1                                                                                                                            GCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTC                  <  3:309880/136‑1                                                                                                                            GCTGCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTC                  >  4:309880/1‑136                                                                                                                               GCTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTCGGCTGACGGGATGTGC  >  6:103688/1‑149                                                                                                                                                                                                                                                                                     TTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTACCTTCGGCGACAGGTGCCTCTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1811484‑1811611 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcTGGAGGCGCACCAACCGCCGAATACGGCGGTATGGGCGCTGTATCCGCAGCAGAGGCACCTGTCGCCGAAGGTACGGCGGCTGGTGGATTACCTGAAGGAGGGGTTGGCGGGGTTGCCGGAGTATCGTTTCGGCTGACGGGATGTGC  <  NC_002947/1811657‑1811511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.