| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1841476 | 46 (0.720) | 6 (0.100) | 5/238 | NT | 12.0% | coding (527/1029 nt) | ldhA | D‑lactate dehydrogenase |
| ? | NC_002947 | = 1841502 | 45 (0.750) | coding (501/1029 nt) | ldhA | D‑lactate dehydrogenase | |||||
GTGGCGAGTGTGCTCGGTCAGTGGGCAGTGCAGGCTGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1841325‑1841476‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggccaGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTTTCGGCTGCCAGCTGCTGGCTTACGACCCCTACCCCAACCCAGAGCTGCTGGCCCTTGGCGCCCGCTACCTGCCCCTGCCCGAGCTATTGCGCGAAGCCCGCATCATCA < NC_002947/1841502‑1841360 GTGGCGAGTGTGCTCGGTCAGTGGGCAGTGCAGGCTGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGG < 8:260455/149‑1 tgtcttGTGTGCTCGGTCAGTGGGCAGTGCAGGCTGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGC < 7:388186/143‑1 TCGGTCAGTGGGCAGTGCAGGCTGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCAGATCGGGGTC > 5:101036/1‑149 GCTGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGC < 6:101036/149‑1 TGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGTCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCAGATCGGGTTCGCCTTCGCTCGCATCATGGCCG < 6:343650/149‑1 ATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGACACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTTT < 1:85329/148‑1 GCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGC > 3:363518/1‑104 GCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGC < 4:363518/104‑1 GCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCG > 1:241190/1‑125 GCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCG < 2:241190/125‑1 CGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTTTCGGCTGCCAGCTGCTGGCTTACGACCCCTACCCCAACCCAGAGCTGCTGGCCCTTGGCGCCCGCTACCTGCCCCTGCCCGAGCTATTGCGCGAAGCCCGCATCATCA < 5:10099/149‑1 CGGCCAGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTTTCGGCTGCCAGCTGCTGGCTTACGACCCCTACCCCAACCCAGAGCTGCTGGCCCTTGGCGCCCGCTACCTGCCCCTGCCCGAGCTATTGCGCGAAGCCCGCATCAT > 5:25476/1‑147 GTGGCGAGTGTGCTCGGTCAGTGGGCAGTGCAGGCTGATGATGCGGGCTTCGCGCAATAGCTCGGGCAGGGGCAGGTAGCGGGCGCCAAGGGCCAGCAGCTCTGGGTTGGGGTAGGGGTCGTAAGCCAGCAGCTGGCAGCCGAAACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1841325‑1841476‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggccaGATCGGGGTCGCCTTCGCTCGCATCATGGCCGGTTTCGGCTGCCAGCTGCTGGCTTACGACCCCTACCCCAACCCAGAGCTGCTGGCCCTTGGCGCCCGCTACCTGCCCCTGCCCGAGCTATTGCGCGAAGCCCGCATCATCA < NC_002947/1841502‑1841360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |