New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2048794 =	71 (1.110)	6 (0.110)	4/220	NT	9.9%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048885 =	48 (0.870)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein

GATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2048957‑2048794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaaggGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGC  >  NC_002947/2048885‑2049028                                                                                                                                                                                                                                                                                                                       GATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACG                                                                                                                                                                 >  2:53985/1‑149  ATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGC                                                                                                                                                                <  8:379303/149‑1  ATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGC                                                                                                                                                                <  2:341831/149‑1   TGTATGATGCCAAGGCAATCATCGCTTACCTGTATGCCCGGTTTGCCGCCATCTGACTGACGCTACATATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGC                                                                                                                                                                <  5:48184/148‑1       TGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCT                                                                                                                                                           >  6:86550/1‑149       TGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCT                                                                                                                                                           >  3:85/1‑149          GTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCC                                                                                                                                                        <  2:293604/149‑1           TCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCA                                                                                                                                                       >  3:139175/1‑149           TCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCCCGGTGGTTTGCACGGGCTGCGCCCCTGTTTCGCGGGACCGCCCcggccc                                                                                                                                                        >  1:409564/1‑143             CAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCAC                                                                                                                                                      >  7:334235/1‑148             CAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCAC                                                                                                                                                      >  5:238058/1‑148             CAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCCTG‑TTCGCGGGCACGCCCGCTCCCAC                                                                                                                                                      >  7:328249/1‑148              AAGGCAATCATCGCTTACCTGGCTGAGCGGGGGGCCGCCATCGGACGGCCGCTGCAGAGCCCGTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTGGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAA                                                                                                                                                    <  1:159183/149‑1              AAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCAC                                                                                                                                                      >  5:318898/1‑147              AAGGCAAGCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGCCGCTCCAGAGCCCTTGGGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGGTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAA                                                                                                                                                    <  5:61045/149‑1               tGGCAATCATCGCTTACGTGGTTGAGCGTTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAG                                                                                                                                                   <  4:139175/148‑1                        TCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAA                                                                                                                                                    <  4:19313/139‑1                        TCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAA                                                                                                                                                    >  3:19313/1‑139                                CTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCC                                                                                                                                                              <  4:203293/121‑1                                CTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCC                                                                                                                                                              >  3:203293/1‑121                                                                                        gtGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACAT                                                                          >  8:283475/3‑149                                                                                         CGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATC                                                                         >  2:62854/1‑149                                                                                                GCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCA                                                                  >  3:301524/1‑149                                                                                                          CACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGC                                                        <  7:283475/149‑1                                                                                                                             GGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCAT                                     <  4:301524/149‑1                                                                                                                                        tgcTTCGCGGGCACCCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCCGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTCGACTCATACATCCAGGTCACATTGCAGGAGACATCAAAGCACAGGCAAGGCACTTTCA                           >  6:246996/4‑149                                                                                                                                                      GCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCT             >  1:10871/1‑149                                                                                                                                                        CCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTC           >  5:119717/1‑149                                                                                                                                                          GCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCT         <  1:62854/149‑1                                                                                                                                                            TCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGTCTTCTTCAAAGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTG        >  2:337967/1‑148                                                                                                                                                            TCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTG        >  4:114867/1‑148                                                                                                                                                              CCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAG     <  3:237442/149‑1                                                                                                                                                              CCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCA      <  2:10871/148‑1                                                                                                                                                                ACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCAGGCTTCTTCAATGCGAAGGCATGGCACTTTCACCCGGCCGCCACCTTACTCCAGGG   >  8:73045/1‑149                                                                                                                                                                 CAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGC  >  5:307966/1‑149                                                                                                                                                                                                                                                                                                                       GATGTATGAGTCCAAGGCAATCATCGCTTACCTGGATGAGCGGTTTGCCGCCATCTGACTGACGCTGCAGATCCCTTGTGGGAGCGGGCGAGCCCGCGAAGCAGGCACCGCGGTGGTTGGCACGGGCTGCGCCCGTG‑TTCGCGGGCACGCCCGCTCCCACAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2048957‑2048794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaaggGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGC  >  NC_002947/2048885‑2049028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.