| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2506599 = | 52 (0.810) | 4 (0.070) | 4/240 | NT | 7.6% | coding (79/582 nt) | PP_2200 | hypothetical protein |
| ? | NC_002947 | 2506640 = | 48 (0.790) | coding (120/582 nt) | PP_2200 | hypothetical protein | |||||
GCCGTCGGCATCGGGCTGCTCGCCGCGCTGCTCGCACTCGAGCATATGCAGGTAGAACCAATCCACCGTCAGCAAATGGTTGAGGGTGGCCTTGATCGACGGGAAGAAGCTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2506748‑2506599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcagCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGAGCAGCCCGATGCCGACGGCGAACGCTTTTTCGACCCGGAACAGCCGTTTGCCACC > NC_002947/2506640‑2506784 GCCGTCGGCATCGGGCTGCTCGCCGCGCTGCTCGCACTCGAGCATATGCAGGTAGAACCAATCCACCGTCAGCAAATGGTTGAGGGTGGCCTTGATCGACGGGAAGAAGCTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGC < 7:130722/148‑1 GAAGAAGCTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGAGCAGCCCGATG > 5:119599/1‑149 AAGCTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGG < 5:114640/96‑1 AAGCTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGG > 6:114640/1‑96 CTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGAGCAGCCCGATGCCGACGG < 6:119599/149‑1 GCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGGGCAGCCCGATGCCGACGGCGAACGCTTTTTCGACCCGGAACAGCCGTTTGCCAC < 6:79552/148‑1 GCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGAGCAGCCCGATGCCGACGGCGAACGCTTTTTCGACCCGGAACAGCCGTTTGCCACC > 3:59235/1‑149 GCAGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGAGCAGCCCGATGCCGACGGCGAACGCTTTTTCGACCCGGAACAGCCGTTTGCCAC < 6:160949/148‑1 AGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGA < 5:296944/92‑1 AGCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGA > 6:296944/1‑92 GCCGTCGGCATCGGGCTGCTCGCCGCGCTGCTCGCACTCGAGCATATGCAGGTAGAACCAATCCACCGTCAGCAAATGGTTGAGGGTGGCCTTGATCGACGGGAAGAAGCTGCAACGCGGGGCGACGAACTCGTCCTGGGTCAGTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2506748‑2506599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcagCTTCTTCCCGTCGATCAAGGCCACCCTCAACCATTTGCTGACGGTGGATTGGTTCTACCTGCATATGCTCGAGTGCGAGCAGCGCGGCGAGCAGCCCGATGCCGACGGCGAACGCTTTTTCGACCCGGAACAGCCGTTTGCCACC > NC_002947/2506640‑2506784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |