| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2555263 | 60 (0.940) | 4 (0.070) | 4/242 | NT | 6.9% | coding (1244/1881 nt) | PP_2240 | ABC transporter permease/ATP‑binding protein |
| ? | NC_002947 | = 2555292 | 51 (0.840) | coding (1273/1881 nt) | PP_2240 | ABC transporter permease/ATP‑binding protein | |||||
TGGGCAGGTGCAGGATTCTCTGTCGTTCTTCCGTGAGTCGTACGATGCGTTCGCGCAGTACCGCGCGACCCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2555114‑2555263‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGTCTTCGGTGGTGACGCGCGGCAACGCACTTGCCTGCTGGTTGGCATCGAGAAAGCCGGTGAGACG < NC_002947/2555292‑2555190 TGGGCAGGTGCAGGATTCTCTGTCGTTCTTCCGTGAGTCGTACGATGCGTTCGCGCAGTACCGCGCGACCCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGC < 3:305713/147‑1TGGGCAGGTGCAGGATTCTCTGTCGTTCTTCCGTGAGTCGTACGATGCGTTCGCGCAGTACCGCGCGACCCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGC < 6:148851/147‑1 GTCGTACGATGCGTTCGCGCAGTACCGCGCGACCCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGCGCAGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCC < 5:120038/149‑1 CGTTCGCGCAGTACCGCGCGACCCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGCGCAGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGTCTTCGG < 4:67080/148‑1 CCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGCGCAGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGT < 1:376153/120‑1 CCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGCGCAGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGT > 2:376153/1‑120 GCGCAGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGTCTTCGGTGGTGACGCGCGGCAACGCACTTGCCTGCTGGTTGGCATCGAGAAAGCCGGTGAGACG > 7:323245/1‑108 GCGCAGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGTCTTCGGTGGTGACGCGCGGCAACGCACTTGCCTGCTGGTTGGCATCGAGAAAGCCGGTGAGACG < 8:323245/108‑1 TGGGCAGGTGCAGGATTCTCTGTCGTTCTTCCGTGAGTCGTACGATGCGTTCGCGCAGTACCGCGCGACCCTTGACCGTCTCACCGGCTTTCTCGATGCCAACCAGCAGGCAAGTGCGTTGCCGCGCGTCACCACCGAAGACCAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2555114‑2555263‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaGCACCTGCAATCCCGTGATCTGCAGCGCATGCGCCTGGTCTTCGGTGGTGACGCGCGGCAACGCACTTGCCTGCTGGTTGGCATCGAGAAAGCCGGTGAGACG < NC_002947/2555292‑2555190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |