| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2581886 = | 65 (1.020) | 4 (0.070) | 4/242 | NT | 5.7% | coding (238/801 nt) | PP_2263 | sugar ABC transporter permease |
| ? | NC_002947 | 2581943 = | 71 (1.160) | coding (295/801 nt) | PP_2263 | sugar ABC transporter permease | |||||
GGTATCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2582038‑2581886‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGTTCAACGTACCGCTGGCGGT > NC_002947/2581943‑2582088 GGTATCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACG < 4:365078/149‑1GGTATCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAAC < 8:183012/148‑1 GTATCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGC > 6:15610/1‑149 TCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCTAGAACGCATAGGCCGCGGGCAACGCCAC > 6:63604/1‑149 TCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGCCAC > 6:57450/1‑149 CAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGCCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTT > 3:36670/1‑149 AGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGCCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTC > 6:231356/1‑149 CGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGCCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACC < 4:36670/149‑1 GCGCGAGAACGCATAGGCCGCGGGCAACGCCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGC < 5:231356/149‑1 CGCCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGTTCAACGTACCGCTGGC > 5:363013/1‑149 CCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGTTCAACGTACCGCTGGCGG > 4:42547/1‑149 CACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGTTCAACGTACCGCTGGCGGT < 6:223216/149‑1 CCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGT < 3:138647/128‑1 CCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGT > 4:138647/1‑128 GGTATCGAACAGCCCGATCGACGAGTACAACTGGAAGAACGGCAGCAGGAACACCGCCGGTGGCGCCATGCGGTTGGTCAGCAGCCAGAAGAACAGGTGGCGGTCGCCGAGAAAGCGGTAGCGCGAGAACGCATAGGCCGCGGGCAACGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2582038‑2581886‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccacCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCACCGGCGGTGTTCCTGCTGCCGTTCTTCCAGTTGTACTCGTCGATCGGGCTGTTCGATACCCACATTGCCGTGGCGCTGGCCCATTGCCTGTTCAACGTACCGCTGGCGGT > NC_002947/2581943‑2582088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |