New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3004980	60 (0.940)	4 (0.070)	4/242	NT	6.3%	coding (1561/3621 nt)	PP_2627	membrane protein
	?	NC_002947	= 3005019	61 (1.000)					coding (1600/3621 nt)	PP_2627	membrane protein

TGGGCTCTGGTGTAGGCATCCTGGCGTTCAGTATCGCCGTTGCCAGCTGGCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTGATCCGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3004831‑3004980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccgCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGGATCAAGACGCATATCGACTTCGTGACCGCTGTACTCCTGGCTTTTGGCGAGCACACTGGCAGCCTTGGCGCCATTGATGTCGGCGTAACGCTGCCAGCTGG  <  NC_002947/3005019‑3004873                                                                                                                                                                                                                                                                                                           TGGGCTCTGGTGTAGGCATCCTGGCGTTCAGTATCGCCGTTGCCAGCTGGCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTATTGATCCGACC                                                                                                                                                      >  6:4906/1‑149                                                               GACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTGATCCGACCGCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGG                                                                                                       <  5:95916/134‑1                                                               GACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTGATCCGACCGCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGG                                                                                                       >  6:95916/1‑134                                                                     AATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTGATCCGACCGCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGGA                                                                                                      >  3:146511/1‑129                                                                     AATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTGATCCGACCGCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGGA                                                                                                      <  4:146511/129‑1                                                                                                                                                   ACCGCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGGATCAAGACGCATATCGACTTCGTGACCGCTGTACTCCTGGCTTTTGGCGAGCACACTGGCAGCCTTGGCGCCATTGATGTCGGCGTAACGCTGCCAGCT    <  3:71627/149‑1                                                                                                                                                      GCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGGATCAAGACGCATATCGACTTCGTGACCGCTGTACTCCTGGCTTTTGGCGAGCACACTGGCAGCCTTGGCGCCACTGATGTCGGCGTAACGCTGCCAGCTGG  >  1:400166/1‑148                                                                                                                                                                                                                                                                                                           TGGGCTCTGGTGTAGGCATCCTGGCGTTCAGTATCGCCGTTGCCAGCTGGCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTGATCCGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3004831‑3004980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccgCATCGCGAATCTGGTCCAGTGGCGCCAGCAGGTTGCGCCCGGTCGGATCAAGACGCATATCGACTTCGTGACCGCTGTACTCCTGGCTTTTGGCGAGCACACTGGCAGCCTTGGCGCCATTGATGTCGGCGTAACGCTGCCAGCTGG  <  NC_002947/3005019‑3004873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.