New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3004980	60 (0.940)	4 (0.070)	4/242	NT	6.3%	coding (1561/3621 nt)	PP_2627	membrane protein
	?	NC_002947	= 3005019	61 (1.000)					coding (1600/3621 nt)	PP_2627	membrane protein

CCAGCTGGCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGCCAGTGGT  >  NC_002947/3004873‑3005165                                                                                                                                                     |                                                                                                                                                       ccAGCTGGCAGCGTTACGCCGACATCAGTGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGc                                                                                                                                                       >  1:400166‑M2/1‑147 (MQ=255)   aGCTGGCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGcggt                                                                                                                                                    <  3:71627‑M2/149‑5 (MQ=255)        gCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCgg                                                                                                                                           >  7:256795/1‑149 (MQ=255)        gCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGACATGCGTCTTGCATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTcgc                                                                                                                                             <  1:318100/148‑1 (MQ=255)              ttACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTg                                                                                                                                     <  2:153979/149‑1 (MQ=255)                 cGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGc                                                                                                                                   >  6:146919/1‑148 (MQ=255)                 cGCCGACATCAATGGCGCC‑AGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGa                                                                                                                                 <  5:52756/149‑1 (MQ=255)                  gCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGa                                                                                                                                 >  8:123575/1‑149 (MQ=255)                       cATCAATGGCGCAAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGATTAAAGCGGTCACGAAGTCGATATGCGTCTTG‑ATACGACAGGGCTCAACCTGCTGGAGCCACTGGACCAGA‑TTCGCTATGC‑‑‑‑GGTCTAGGTGTTTGGCGACTATc                                                                                                                            >  3:309187/1‑149 (MQ=255)                        aTCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCg                                                                                                                           >  5:206137/1‑149 (MQ=255)                            aTGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCg                                                                                                                       <  8:206532/149‑1 (MQ=255)                                   cAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGc                                                                                                                >  6:242266/1‑149 (MQ=255)                                   cAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGc                                                                                                                <  4:71627/149‑1 (MQ=255)                                    aaGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGcc                                                                                                               >  1:245561/1‑149 (MQ=255)                                        cTGGCAGTGTGCTCTACAAAAGCCATGAGTACATCGGTCACGAAGTCGATATGCGTATTG‑ATCCGACCTTGCGCAACCTTCTGGCGCAACTGGACAAGA‑TTCGCGATGA‑‑‑‑TGTCGCGGTGTTTTTCGACTATCGTGCGGCCTGGCCggt                                                                                                            <  4:309187/148‑1 (MQ=255)                                        cTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCggtg                                                                                                           <  5:146919/149‑1 (MQ=255)                                           ccAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGtt                                                                                                        >  8:337211/1‑149 (MQ=255)                                            cAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTg                                                                                                       >  7:59643/1‑149 (MQ=255)                                            cAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTg                                                                                                       >  7:61787/1‑149 (MQ=255)                                                    tCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGATGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGAtttt                                                                                               >  2:109756/1‑149 (MQ=255)                                                      gCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTgg                                                                                             <  6:206137/149‑1 (MQ=255)                                                       ccAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGc                                                                                            <  8:23540/149‑1 (MQ=255)                                                        cAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCt                                                                                           >  1:172883/1‑149 (MQ=255)                                                        cAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCt                                                                                           >  3:145980/1‑149 (MQ=255)                                                          aaaGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGgt                                                                                                                                          >  1:399972/1‑100 (MQ=255)                                                          aaaGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGgt                                                                                                                                          <  2:399972/100‑1 (MQ=255)                                                          aaaGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTg                                                                                         <  8:256795/149‑1 (MQ=255)                                                                            gTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACAtt                                                                       >  3:210739/1‑149 (MQ=255)                                                                             tCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTg                                                                      <  7:337211/149‑1 (MQ=255)                                                                               aCGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGt                                                                    >  1:50043/1‑149 (MQ=255)                                                                                 gAAGTCGATATGCGTCTTG‑ATCCGACCGGGCTCAAACTGCGGTCGCCACTGGTCCACATTTCCATACCCCCCTGGTCGCGGTGTTTGGCGACTATGGTGCTGCCTGGCAGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCTCAACAtt                                                                       <  1:131607/149‑1 (MQ=255)                                                                                 gAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAg                                                                                  <  2:251813/133‑1 (MQ=255)                                                                                 gAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAg                                                                                  >  1:251813/1‑133 (MQ=255)                                                                                 gAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTcc                                                                  >  4:125693/1‑149 (MQ=255)                                                                                   aGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCt                                                                <  4:210739/149‑1 (MQ=255)                                                                                    gTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCtt                                                               >  2:277077/1‑149 (MQ=255)                                                                                     tCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTg                                                              >  5:217963/1‑149 (MQ=255)                                                                                       gATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTgg                                                             <  4:401467/148‑1 (MQ=255)                                                                                           tGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTtgat                                                        <  8:61787/149‑1 (MQ=255)                                                                                           tGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTtgat                                                        <  8:59643/149‑1 (MQ=255)                                                                                             cGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTtgatga                                                      <  5:242266/149‑1 (MQ=255)                                                                                              gTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCGGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCtt                                                               <  3:254820/139‑1 (MQ=255)                                                                                              gTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCtt                                                               >  4:254820/1‑139 (MQ=255)                                                                                              gTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAg                                                     <  1:42293/149‑1 (MQ=255)                                                                                              gTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAg                                                     <  2:50043/149‑1 (MQ=255)                                                                                               tCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAgg                                                    <  3:125693/149‑1 (MQ=255)                                                                                                      tCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGcggtcggatcaagacgcatatcgacttcgtgaccgctgtactcctggcttttggcgagcacactggcagccttggcgccatt                                                                      <  4:146511‑M2/129‑83 (MQ=255)                                                                                                      tCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGcggtcggatcaagacgcatatcgacttcgtgaccgctgtactcctggcttttggcgagcacactggcagccttggcgccatt                                                                      >  3:146511‑M2/1‑47 (MQ=255)                                                                                                       ccGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGcggtcggatcaagacgcatatcgacttcgtgaccgctgtactcctggcttttggcgagcacactggcagccttggcgccattgatgtc                                                                <  5:95916‑M2/134‑89 (MQ=255)                                                                                                       ccGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGcggtcggatcaagacgcatatcgacttcgtgaccgctgtactcctggcttttggcgagcacactggcagccttggcgccattgatgtc                                                                >  6:95916‑M2/1‑46 (MQ=255)                                                                                                         gACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGa                                                                                                   <  7:289252/93‑1 (MQ=255)                                                                                                         gACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGa                                                                                                   >  8:289252/1‑93 (MQ=255)                                                                                                               gcgcAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCttgt                                     >  8:288514/1‑149 (MQ=255)                                                                                                               gcgcAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCttgt                                     >  2:64652/1‑149 (MQ=255)                                                                                                                 gcAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCtt                                                                                          >  5:54796/1‑94 (MQ=255)                                                                                                                 gcAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCtt                                                                                          <  6:54796/94‑1 (MQ=255)                                                                                                                  cAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTtgttgt                                  <  6:217963/149‑1 (MQ=255)                                                                                                                    aCCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCttgtt                                    <  5:49344/145‑1 (MQ=255)                                                                                                                    aCCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCttgtt                                    >  6:49344/1‑145 (MQ=255)                                                                                                                       aggttgcgcCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTaaa                             <  5:387241/144‑1 (MQ=255)                                                                                                                         ctgGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTaaa                             <  1:64652/147‑1 (MQ=255)                                                                                                                         ctgGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAAc                            <  1:277077/148‑1 (MQ=255)                                                                                                                            gcgcCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGTCCGGTTGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGttt                        <  7:123575/149‑1 (MQ=255)                                                                                                                                cACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTtgttgt                                  <  4:396967/135‑1 (MQ=255)                                                                                                                                cACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTtgttgt                                  >  3:396967/1‑135 (MQ=255)                                                                                                                                 aCTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGc                   >  8:3157/1‑149 (MQ=255)                                                                                                                                     gACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCg                 <  2:245561/147‑1 (MQ=255)                                                                                                                                         aGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTg           <  7:276395/149‑1 (MQ=255)                                                                                                                                             ttCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGcc        <  2:172883/149‑1 (MQ=255)                                                                                                                                                gcgATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGCCAgt     >  7:93478/1‑149 (MQ=255)                                                                                                                                                gcgATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGCCAgt     >  1:404008/1‑149 (MQ=255)                                                                                                                                                 cgATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGCCAgtg    <  7:288514/149‑1 (MQ=255)                                                                                                                                                   aTGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGCCAgtggt  <  4:145980/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       CCAGCTGGCAGCGTTACGCCGACATCAATGGCGCCAAGGCTGCCAGTGTGCTCGCCAAAAGCCAGGAGTACAGCGGTCACGAAGTCGATATGCGTCTTG‑ATCCGACCGGGCGCAACCTGCTGGCGCCACTGGACCAGA‑TTCGCGATGC‑‑‑‑GGTCGCGGTGTTTGGCGACTATCGTGCGGCCTGGCCGGTGGTTGCCGATTTTGGCTTGTATCAAGGGCGCAACATTGGTCCCTTGGTTGATGAGGCGTACCTCAGCTTGTTGTCTAAACGTTTCTTGCCGGCCTTGGCCAGTGGT  >  NC_002947/3004873‑3005165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.