| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3027462 = | 51 (0.800) | 4 (0.070) | 3/238 | NT | 7.9% | coding (827/1491 nt) | PP_2642 | GntR family transcriptional regulator |
| ? | NC_002947 | 3027540 = | 46 (0.770) | coding (905/1491 nt) | PP_2642 | GntR family transcriptional regulator | |||||
GTGCCGCTGCTGGCGGTCGCTGGCCAAAGGCAGATAGGGCCGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3027616‑3027462‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggtcgAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTATATCGTGGCACCGGT > NC_002947/3027540‑3027687 GTGCCGCTGCTGGCGGTCGCTGGCCAAAGGCAGATAGGGCCGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCG > 4:329183/1‑149GTGCCGCTGCTGGCGGTCGCTGGCCAAAGGAAGATAGGGCCGCCCGGCGAAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTCCGCCCGGCTGGCAGGCTGACC > 1:95860/1‑149 CCGCTGCTGGCGGTCGCTGGCCAAAGGCAGATAGGGCCGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGG > 6:184651/1‑149 CCGCTGCTGGCGGTCGCTGGCCAAAGGCAGATAGGGCCGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTG < 2:251335/148‑1 CGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTC > 1:86411/1‑114 CGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTC < 2:86411/114‑1 CTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAG > 2:365841/1‑149 CTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAG > 7:50254/1‑149 CTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTG < 8:50254/149‑1 GCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTG < 1:365841/149‑1 CGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTATATCGTG < 2:367169/148‑1 GTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTATATCGTGG > 1:220800/1‑148 TGGTCGAAGAGGATTACGACTACGAATAACACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTATATCGTGGCA > 1:24957/1‑149 GAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTATATCGTGGCACCGGT > 1:364817/1‑149 GTGCCGCTGCTGGCGGTCGCTGGCCAAAGGCAGATAGGGCCGCCCGGC‑AAAGTGGTATTCGTAGTCGTAATCCTCTTCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3027616‑3027462‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggtcgAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTATATCGTGGCACCGGT > NC_002947/3027540‑3027687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |