New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3395975 =	52 (0.810)	6 (0.100)	4/244	NT	11.1%	coding (137/456 nt)	PP_3000	MaoC domain‑containing protein
	?	NC_002947	3396024 =	46 (0.750)					coding (186/456 nt)	PP_3000	MaoC domain‑containing protein

CCTTGATCGGCAGCACGAAGTCCCAGGTCCAGCCCAGCGACATGCCCGGCA‑GGAAGCGGTACTCGCACTGGGTCTTCAGGCCGTCGGCGATCGACAGCCCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3396127‑3395975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTGGGACTTCGTGCTGCC  >  NC_002947/3396024‑3396119                                                                                                                                                                                                                                                            CCTTGATCGGCAGCACGAAGTCCCAGGTCCAGCCCAGCGACATGCCCGGCA‑GGAAGCGGTACTCGCACTGGGTCTTCAGGCCGTCGGCGATCGACAGCCCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAG                                                                                                      <  3:244610/149‑1  CTTGATCGGCAGCACGAAGTCCCAGGTCCAGCCCAGCGACATGCCCGGCAGGGAAGCGGTACTCGCACTGGGTCTTCAGGCCGTCGGCGATCGACAGCCCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAG                                                                                                      >  1:313428/1‑149   TTGATCGGCAGCACGAAGTCCCAGGTCCAGCCCAGCGACATGCCCGGCA‑GGAAGCGGTACTCGCACTGGGTCTTCAGGCCGTCGGCGATCGACAGCCCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGC                                                                                                    >  3:74527/1‑149      ATCGGCAGCACGAAGTCCCAGGTCCAGCCCAGCGACATGCCCGGCA‑GGAAGCGGTACTCGCACTGGGTCTTCAGGCCGTCGGCGATCGACAGCCCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCT                                                                                                  >  1:364008/1‑148                                                                                                    CCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCTGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTGG                <  3:45947/137‑1                                                                                                    CCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCTGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTGG                >  4:45947/1‑137                                                                                                      GAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCTGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCcgaga                    >  3:223977/1‑126                                                                                                      GAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCTGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTGGGACTTCGTGCTGCC  >  5:142276/1‑149                                                                                                      GAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCTGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTG                 <  1:188117/134‑1                                                                                                      GAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCTGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTG                 >  2:188117/1‑134                                                                                                                                                                                                                                                            CCTTGATCGGCAGCACGAAGTCCCAGGTCCAGCCCAGCGACATGCCCGGCA‑GGAAGCGGTACTCGCACTGGGTCTTCAGGCCGTCGGCGATCGACAGCCCGAACAGGCCGTGGGCGACCAGGCAGCCAAAGTGGCTGGCGTTGGCGTAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3396127‑3395975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctGTTCGGGCTGTCGATCGCCGACGGCCTGAAGACCCAGTGCGAGTACCGCTTCCTGCCGGGCATGTCGCTGGGCTGGACCTGGGACTTCGTGCTGCC  >  NC_002947/3396024‑3396119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.