New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3806509	69 (1.080)	6 (0.100)	4/244	NT	7.7%	coding (1125/2544 nt)	PP_3364	two‑component system response regulator
	?	NC_002947	= 3806548	77 (1.250)					coding (1164/2544 nt)	PP_3364	two‑component system response regulator

AGCCTGCTGCGCGACGCCAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3806357‑3806509 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGTGGAA  <  NC_002947/3806548‑3806402                                                                                                                                                                                                                                                                                                              AGCCTGCTGCGCGACGCCAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAAC                                                                                                                                                         <  4:2237/149‑1                                  ATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCTTCGCTGACCATGTCTGCCAGGCGCAG                                                                                                                          >  2:357178/1‑147                                            TCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCAC                                                                                                              >  6:231399/1‑149                                            TCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCAC                                                                                                              >  6:237175/1‑149                                                 CACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCG                                                                                                         <  5:231399/149‑1                                                 CACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCG                                                                                                         <  5:237175/149‑1                                                    GCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTT                                                                                                      <  1:357178/149‑1                                                                                                                                                     CGGCCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGT      <  6:269462/148‑1                                                                                                                                                        CCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGGCGGCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGTGGAA  <  2:273718/149‑1                                                                                                                                                        CCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGTGGAA  <  2:358540/149‑1                                                                                                                                                        CCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGTGGAA  <  2:386909/149‑1                                                                                                                                                        CCTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGTGGAA  <  7:256006/149‑1                                                                                                                                                         CTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGC                               >  3:137906/1‑119                                                                                                                                                         CTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGC                               <  4:137906/119‑1                                                                                                                                                                                                                                                                                                              AGCCTGCTGCGCGACGCCAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3806357‑3806509 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTTCGCTGACCATGTCTGCCAGGCGCAGCAGATCAGGCACGGCCGTTTGGGGCGGCGCCAGCCCTGCGCACGACCAGCGGCCTAGCAGCGACATGCCGATGCCGTCGCAGGGAATCAGCGACATCAACCGGGGCAGGCGTGCGTGGAA  <  NC_002947/3806548‑3806402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.