New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3806509	69 (1.080)	6 (0.100)	4/244	NT	7.7%	coding (1125/2544 nt)	PP_3364	two‑component system response regulator
	?	NC_002947	= 3806548	77 (1.250)					coding (1164/2544 nt)	PP_3364	two‑component system response regulator

ACGCCAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGCAACACCCAAGGG  >  NC_002947/3806370‑3806657                                                                                                                                            |                                                                                                                                                       aCGCCAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGAt                                                                                                                                             >  6:321423/1‑149 (MQ=255)     cAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATctgc                                                                                                                                         >  1:247253/1‑149 (MQ=255)      aaCCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATctgct                                                                                                                                        >  5:2821/1‑149 (MQ=255)       aCCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATctgctg                                                                                                                                       <  7:46099/149‑1 (MQ=255)       aCCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATctgctg                                                                                                                                       >  7:391447/1‑149 (MQ=255)        ccAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCtgctgc                                                                                                                                      >  2:86038/1‑149 (MQ=255)             cggcggACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTg                                                                                                                                 <  1:86038/149‑1 (MQ=255)              ggcggACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTgg                                                                                                                                <  4:262550/149‑1 (MQ=255)               gcggACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGc                                                                                                                               <  3:308420/149‑1 (MQ=255)               gcggACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGc                                                                                                                               <  5:256235/149‑1 (MQ=255)                     aTTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCttcgctgaccatgtctgccaggcgcag                                                                                                                             >  2:357178‑M1/1‑120 (MQ=255)                      ttGATGGGTTCTTCTACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATg                                                                                                                        <  7:132391/149‑1 (MQ=255)                       tGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGGGCAGGGCTGGCGCCGCCCCATCCGGCCG‑‑TGCCTGATCTGCTGCGCCTg                                                                                                                                 <  3:89032/139‑1 (MQ=255)                       tGATGGGTTCTTCCACGCACGCCTGCCCCGCTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTCCGCAGGCCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTg                                                                                                                                 >  4:89032/1‑139 (MQ=255)                          tGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCa                                                                                                                    <  8:391447/149‑1 (MQ=255)                             gTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGc                                                                                                                  >  3:72434/1‑148 (MQ=255)                              ttcttcCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCg                                                                                                                 >  1:45237/1‑148 (MQ=255)                              ttcttcCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TCCCTGATCTGCTCCGCCTGGCAGACAAGGTCAGCg                                                                                                                 >  7:179612/1‑148 (MQ=255)                               tcttcCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCttcgctgaccatgtctgccaggcgcagcagatcaggcac                                                                                                                 >  6:237175‑M1/1‑110 (MQ=255)                               tcttcCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCttcgctgaccatgtctgccaggcgcagcagatcaggcac                                                                                                                 >  6:231399‑M1/1‑110 (MQ=255)                                 ttCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGCCGCCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAgg                                                                                                             <  2:273718‑M2/149‑3 (MQ=255)                                 ttCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAgg                                                                                                             <  2:358540‑M2/149‑3 (MQ=255)                                 ttCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAgg                                                                                                             <  2:386909‑M2/149‑3 (MQ=255)                                 ttCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAgg                                                                                                             <  7:256006‑M2/149‑3 (MQ=255)                                    cacgcacgCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCttcgctgaccatgtctgccaggcgcagcagatcaggcacggccg                                                                                                            <  5:237175‑M1/149‑45 (MQ=255)                                    cacgcacgCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCttcgctgaccatgtctgccaggcgcagcagatcaggcacggccg                                                                                                            <  5:231399‑M1/149‑45 (MQ=255)                                     acgcacgcCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAggccg                                                                                                          <  6:269462‑M2/148‑6 (MQ=255)                                       gcacgcCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgttt                                                                                                         <  1:357178‑M1/149‑48 (MQ=255)                                       gcacgcCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAAt                                                                                                       >  3:293620/1‑149 (MQ=255)                                                ccccGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGTAGACATGGTCAGCGAAGGCCGAATCTGGGCGTc                                                                                              <  1:263212/149‑1 (MQ=255)                                                   cGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCaa                                                                                           >  5:305265/1‑149 (MQ=255)                                                        gATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGc                                                                                       <  8:256006/148‑1 (MQ=255)                                                         aTGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGcc                                                                                      <  2:245966/148‑1 (MQ=255)                                                            tCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGt                                                                                   <  5:212839/148‑1 (MQ=255)                                                              gCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAg                                                                                                              <  4:137906‑M2/119‑2 (MQ=255)                                                              gCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAg                                                                                                              >  3:137906‑M2/1‑118 (MQ=255)                                                                  aTTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCa                                                                                                                    <  3:121089/109‑1 (MQ=255)                                                                  aTTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCa                                                                                                                    >  4:121089/1‑109 (MQ=255)                                                                  aTTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACgg                                                                             <  2:247253/148‑1 (MQ=255)                                                                  aTTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACgg                                                                             <  6:385776/148‑1 (MQ=255)                                                                      ccTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCTCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGc                                                                                                 <  5:292526/124‑1 (MQ=255)                                                                      ccTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGc                                                                                                 >  6:292526/1‑124 (MQ=255)                                                                      ccTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCtt                                                                        <  6:42587/149‑1 (MQ=255)                                                                      ccTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCtt                                                                        >  2:151507/1‑149 (MQ=255)                                                                          cGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTcc                                                                      <  7:125863/147‑1 (MQ=255)                                                                          cGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGt                                                                    <  1:358540/149‑1 (MQ=255)                                                                           gACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCGGATGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCg                                                                     >  1:122150/1‑149 (MQ=255)                                                                              ggcatcggcatGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGc                                                                <  3:161713/149‑1 (MQ=255)                                                                               gcatcggcatGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGCATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGcc                                                               >  5:142858/1‑149 (MQ=255)                                                                                 atcggcatGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCa                                                             <  6:305265/149‑1 (MQ=255)                                                                                     gcatGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCg                                                         >  8:283781/1‑149 (MQ=255)                                                                                          tCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGCCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTAttt                                                    >  4:389389/1‑149 (MQ=255)                                                                                            gctgctAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTa                                                  <  7:4096/149‑1 (MQ=255)                                                                                                 tAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAatgat                                             >  3:340147/1‑149 (MQ=255)                                                                                                 tAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAatgat                                             >  3:16741/1‑149 (MQ=255)                                                                                                   ggCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGAtgt                                           >  2:380722/1‑149 (MQ=255)                                                                                                   ggCCGCTCGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCCACGGTACTACCGTCGGCCCACGCGAATTTTAatgaact                                           >  4:17126/1‑146 (MQ=255)                                                                                                    gCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCt                                                                                     <  8:229134/106‑1 (MQ=255)                                                                                                    gCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCt                                                                                     >  7:229134/1‑106 (MQ=255)                                                                                                    gCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGAtgtg                                          <  1:386909/149‑1 (MQ=255)                                                                                                           gTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGgtg                                   >  1:1106/1‑149 (MQ=255)                                                                                                           gTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGgt                                    <  2:45237/148‑1 (MQ=255)                                                                                                            tCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGgtgt                                  <  3:389389/149‑1 (MQ=255)                                                                                                            tCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGgtgt                                  >  1:47296/1‑149 (MQ=255)                                                                                                                gcgcAGGGCTGGCGCCGCCCCAACCGCCCG‑‑TGCCTGATCCGCCGCGCCGGGCAGACAGGGTCAGCGTAGGCCGAATCTGGCCGTCCACTCGCCGGTCGACCGCGCTTCCGTCGGCCCAGGCGTACTTTAATGATGTGGCTGGAGTGCTg                              <  6:142858/149‑1 (MQ=255)                                                                                                                 cgcAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGa                             <  5:269462/149‑1 (MQ=255)                                                                                                                 cgcAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGa                             <  3:24913/149‑1 (MQ=255)                                                                                                                   cAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGatt                           <  5:321423/149‑1 (MQ=255)                                                                                                                     gggCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGattat                         >  6:208948/1‑149 (MQ=255)                                                                                                                       gCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTc                       <  4:16741/149‑1 (MQ=255)                                                                                                                        cTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTcc                      <  4:293620/149‑1 (MQ=255)                                                                                                                           gcgcCGCCCCAATCGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCATACATGGTCAGCGAAGGCCGAATCTTGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGa                    <  3:17126/148‑1 (MQ=255)                                                                                                                           gcgcCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGc                                                                                                 <  3:400903/71‑1 (MQ=255)                                                                                                                           gcgcCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGc                                                                                                 >  4:400903/1‑71 (MQ=255)                                                                                                                           gcgcCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGAt                   >  1:390856/1‑149 (MQ=255)                                                                                                                           gcgcCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGAt                   >  5:25197/1‑149 (MQ=255)                                                                                                                                gccCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCg               >  2:54475/1‑148 (MQ=255)                                                                                                                                 ccccAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGc              >  2:358067/1‑148 (MQ=255)                                                                                                                                 ccccAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGc              >  3:389441/1‑148 (MQ=255)                                                                                                                                    cAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGc                                                                          <  4:120765/85‑1 (MQ=255)                                                                                                                                    cAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGc                                                                          >  3:120765/1‑85 (MQ=255)                                                                                                                                     aaaCGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgc         <  1:357178‑M2/149‑103 (MQ=255)                                                                                                                                     aaaCGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGCAacac         >  6:342427/1‑149 (MQ=255)                                                                                                                                        cGGCCttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgcgt         <  6:269462‑M1/148‑144 (MQ=255)                                                                                                                                        cGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgcgtg      <  5:237175‑M2/149‑106 (MQ=255)                                                                                                                                        cGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgcgtg      <  5:231399‑M2/149‑106 (MQ=255)                                                                                                                                          gCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGCAACACCCAAg    >  5:202687/1‑149 (MQ=255)                                                                                                                                           ccttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatggcggcgcagggaatcagcgacatcaaccggggcaggcgtgcgtggaa     <  2:273718‑M1/149‑148 (MQ=255)                                                                                                                                           ccttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgcgtggaa     <  7:256006‑M1/149‑148 (MQ=255)                                                                                                                                           ccttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgcgtggaa     <  2:358540‑M1/149‑148 (MQ=255)                                                                                                                                           ccttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagcgacatcaaccggggcaggcgtgcgtggaa     <  2:386909‑M1/149‑148 (MQ=255)                                                                                                                                           ccG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGCAACACCCAAgg   >  2:314239/1‑149 (MQ=255)                                                                                                                                            cttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagc                                  <  4:137906‑M1/119‑119 (MQ=255)                                                                                                                                            cttcgctgaccatgtctgccaggcgcagcagatcaggcacggccgtttggggcggcgccagccctgcgcacgaccagcggcctagcagcgacatgccgatgccgtcgcagggaatcagc                                  >  3:137906‑M1/1‑1 (MQ=255)                                                                                                                                            cG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGCAACACCCAAggg  <  6:25197/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                       ACGCCAACCAGGCGGCGGACATTGATGGGTTCTTCCACGCACGCCTGCCCCGGTTGATGTCGCTGATTCCCTGCGACGGCATCGGCATGTCGCTGCTAGGCCGCTGGTCGTGCGCAGGGCTGGCGCCGCCCCAAACGGCCG‑‑TGCCTGATCTGCTGCGCCTGGCAGACATGGTCAGCGAAGGCCGAATCTGGGCGTCCAATCGCCTGTCGACGGTGCTTCCGTCGGCCCAGGCGTATTTTAATGATGTGTCTGGTGTGCTGATTATTCCGATGTCGCAACACCCAAGGG  >  NC_002947/3806370‑3806657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.