| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3943735 = | 50 (0.780) | 3 (0.050) | 3/242 | NT | 6.2% | coding (158/1866 nt) | PP_3478 | secretion protein |
| ? | NC_002947 | 3943778 = | 43 (0.710) | coding (115/1866 nt) | PP_3478 | secretion protein | |||||
GTCAAAGCTGTGCAAGCCTGCTCCGTTTCTGCTCGTGGCGCTGTGCGTGGCCATTGCCGGTTGCGGCTCCAGTGCGGTTCGCCAGGACAGCGACCAGCTGATGAAAGAGGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3943884‑3943735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGACTGG > NC_002947/3943778‑3943925 GTCAAAGCTGTGCAAGCCTGCTCCGTTTCTGCTCGTGGCGCTGTGCGTGGCCATTGCCGGTTGCGGCTCCAGTGCGGTTCGCCAGGACAGCGACCAGCTGATGAAAGAGGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCC < 3:15830/149‑1GTCAAAGCTGTGCAAGCCTGCTCCGTTTCTGCTCGTGGCGCTGTGCGTGGCCATTGCCGGTTGCGGCTCCAGTGCGGTTCGCCAGGACAGCGACCAGCTGATGAAAGAGGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCC > 6:73015/1‑149 AAGAGGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTT > 6:160824/1‑149 GGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCT < 3:337519/144‑1 GGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCT > 4:337519/1‑144 GCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGATCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGA < 1:81929/149‑1 GCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGCCTGC < 7:82650/147‑1 CCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGAC > 1:181218/1‑149 CTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGTCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGACT > 1:268946/1‑149 CTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGACTG < 1:207330/149‑1 CTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGACTG < 3:390777/149‑1 CTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCC < 1:74510/127‑1 CTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCC > 2:74510/1‑127 TCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGACTGG > 6:281255/1‑149 GTCAAAGCTGTGCAAGCCTGCTCCGTTTCTGCTCGTGGCGCTGTGCGTGGCCATTGCCGGTTGCGGCTCCAGTGCGGTTCGCCAGGACAGCGACCAGCTGATGAAAGAGGGCCAGTACGAGGCCGGCATCGCTCGCCTGGAAGAGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3943884‑3943735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCG‑CACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTTGACGACTTCATGGTGCGCTCCCGACAGACAAGGTCTGCGACTGG > NC_002947/3943778‑3943925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |