New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3943735 =	50 (0.780)	3 (0.050)	3/242	NT	6.2%	coding (158/1866 nt)	PP_3478	secretion protein
	?	NC_002947	3943778 =	43 (0.710)					coding (115/1866 nt)	PP_3478	secretion protein

GTGAGCACCCGGCCGTAGCCCATCCGGGCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTT  >  NC_002947/3943588‑3943881                                                                                                                                                     |                                                                                                                                                   ccagtcgcagaccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaaga                                                                                                                                                    >  6:281255‑M1/149‑149 (MQ=255)  cagtcgcagaccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagag                                                                                                                                                   <  3:390777‑M1/2‑1 (MQ=255)  cagtcgcagaccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagag                                                                                                                                                   <  1:207330‑M1/2‑1 (MQ=255)  agtcgcagaccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgacggttcgccaggacagcgaccagctgatgaaagag                                                                                                                                                   >  1:268946‑M1/148‑149 (MQ=255)    gtcgcagaccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagAggg                                                                                                                                                 >  1:181218‑M1/146‑149 (MQ=255)     tcgcagaccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggatccagtgcggttcgccaggacagcgaccagctgatgaaagAGGGc                                                                                                                                                <  1:81929‑M1/5‑1 (MQ=255)       gcaggccttgtctgtcgggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagAGGGc                                                                                                                                                <  7:82650‑M1/5‑1 (MQ=255)               gTAGCCCATCCGGGCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGgc                                                                                                                                     <  3:145813/149‑1 (MQ=255)               gTAGCCCATCCGGGCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGgc                                                                                                                                     <  6:266568/149‑1 (MQ=255)                  gCCCATCCGGGCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGgcgag                                                                                                                                  >  2:197902/1‑149 (MQ=255)                    ccggatgggCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGgcgagc                                                                                                                                 >  2:190514/7‑148 (MQ=255)                      aTCCGGGCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGAt                                                                                                                              >  4:171848/1‑149 (MQ=255)                        ggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagag                                                                                                                                                   <  1:74510‑M1/2‑1 (MQ=255)                        ggagcgcaccatgaagtcgtcaaagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagag                                                                                                                                                   >  2:74510‑M1/126‑127 (MQ=255)                           ggCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCg                                                                                                                          >  1:239901/1‑148 (MQ=255)                           ggCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCg                                                                                                                          <  2:239901/148‑1 (MQ=255)                               ttGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTc                                                                                                                     <  4:49336/149‑1 (MQ=255)                                 ggCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCg                                                                                                                    <  1:56578/148‑1 (MQ=255)                                  gCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGc                                                                                                                                                <  1:353912/119‑1 (MQ=255)                                  gCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGc                                                                                                                                                >  2:353912/1‑119 (MQ=255)                                  gCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGcc                                                                                                                           <  1:182620/140‑1 (MQ=255)                                  gCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGcc                                                                                                                           >  2:182620/1‑140 (MQ=255)                                  gCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTa                                                                                                                  >  5:229950/1‑149 (MQ=255)                                           tGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCctc                                                                                                         >  3:338225/1‑149 (MQ=255)                                              aagctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCtt                                                                                                       >  6:160824‑M1/104‑149 (MQ=255)                                               ggACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCttt                                                                                                      >  4:90903/1‑148 (MQ=255)                                               agctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGccc                                                                                                           >  4:337519‑M1/103‑144 (MQ=255)                                               agctgtgcaagcctgctccgtttctgctcgtggcgctgtgcgtggccattgccggttgcggctccagtgcggttcgccaggacagcgaccagctgatgaaagAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGccc                                                                                                           <  3:337519‑M1/42‑1 (MQ=255)                                                    cgGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAg                                                                                                <  1:197902/149‑1 (MQ=255)                                                       tCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGgcga                                                                                                                                   <  6:244365/111‑1 (MQ=255)                                                       tCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGgcga                                                                                                                                   >  5:244365/1‑111 (MQ=255)                                                          cTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCTTCAGCtagat                                                                                          >  3:239391/1‑145 (MQ=255)                                                          cTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGc                                                                                               <  4:239391/144‑1 (MQ=255)                                                          cTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTc                                                                                          <  5:173719/149‑1 (MQ=255)                                                           tGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCg                                                                                         >  5:409743/1‑149 (MQ=255)                                                                gCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTc                                                                                    >  7:331310/1‑149 (MQ=255)                                                                gCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTc                                                                                    >  5:269441/1‑149 (MQ=255)                                                                   tGGCCAATCAGGGCCTCGACCGCCTGCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCt                                                                                  >  7:257632/1‑149 (MQ=255)                                                                     gCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTgg                                                                                <  8:331310/148‑1 (MQ=255)                                                                             gggCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGc                                                                                                                                                >  5:294786/1‑76 (MQ=255)                                                                             gggCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGc                                                                                                                                                <  6:294786/76‑1 (MQ=255)                                                                                   ccacagcc‑gccAGGCGGCGGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTT‑CAGGCGAGCGATGCCCGCCACGTACAGGCCCACTTTAATAAGCTTGTCCCGGTGCTGGCGCACCGCACTGGAGc                                                                >  6:329324/6‑149 (MQ=255)                                                                                     aCCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGcc                                                               <  8:257632/149‑1 (MQ=255)                                                                                          c‑gccTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAAc                                                          <  7:233479/149‑1 (MQ=255)                                                                                             ccTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCg                                                        <  4:338225/149‑1 (MQ=255)                                                                                                 gcggcTGTGGGCCAGGGTGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCaa                                                    <  7:116336/149‑1 (MQ=255)                                                                                                 gcggcTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCaa                                                    >  4:13287/1‑149 (MQ=255)                                                                                                  cgggggggggCCTGGGCTATATTCAGCTCTGTATCACGCGCACCGTCGCGACGGGCCTCTT‑CAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATg                                                  <  5:329324/142‑1 (MQ=255)                                                                                                   ggcTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTATCAACAGATGCTCGCTGTCCTGACGACCCGCACTGGAGCCGCAACCGGCAATg                                                  >  7:166171/1‑149 (MQ=255)                                                                                                     cTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGc                                                >  6:56765/1‑149 (MQ=255)                                                                                                        tgGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCAc                                             >  7:328042/1‑149 (MQ=255)                                                                                                          ggCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACg                                            >  7:206595/1‑148 (MQ=255)                                                                                                          ggCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGc                                           <  3:90903/149‑1 (MQ=255)                                                                                                            ccAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGca                                          >  4:390777/1‑148 (MQ=255)                                                                                                             cAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGca                                          >  5:73015/1‑147 (MQ=255)                                                                                                                    atatTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGACCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCAc                                 >  1:68199/1‑149 (MQ=255)                                                                                                                       ttCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGa                               <  6:229950/148‑1 (MQ=255)                                                                                                                            ctctGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGa                          >  5:367962/1‑148 (MQ=255)                                                                                                                                     aCGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCaa                                                    >  1:164588/1‑113 (MQ=255)                                                                                                                                     aCGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCaa                                                    <  2:164588/113‑1 (MQ=255)                                                                                                                                     aCGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAg                >  3:220727/1‑149 (MQ=255)                                                                                                                                     aCGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAg                >  2:269644/1‑149 (MQ=255)                                                                                                                                      cgcgGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAgg               <  3:171848/149‑1 (MQ=255)                                                                                                                                        cgGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGa                               >  1:86650/1‑131 (MQ=255)                                                                                                                                        cgGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGa                               <  2:86650/131‑1 (MQ=255)                                                                                                                                         ggATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCtt            <  8:328042/149‑1 (MQ=255)                                                                                                                                                 gcgcAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCt    >  2:207330/1‑149 (MQ=255)                                                                                                                                                   gcAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCttt  <  6:409743/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GTGAGCACCCGGCCGTAGCCCATCCGGGCATTGGCGAAGTCATGGCGGACGCGGTCGCTGTCGGCCTGGCCAATCAGGGCCTCGACCGCC‑GCCTGGCGGCTGTGGGCCAGGGCGATATTCAGCTCTGTATCACGCGGATCGTCGCGCAGGGCCTCTTCCAGGCGAGCGATGCCGGCCTCGTACTGGCCCTCTTTCATCAGCTGGTCGCTGTCCTGGCGAACCGCACTGGAGCCGCAACCGGCAATGGCCACGCACAGCGCCACGAGCAGAAACGGAGCAGGCTTGCACAGCTTT  >  NC_002947/3943588‑3943881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.