New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4202298 =	57 (0.890)	4 (0.060)	4/246	NT	7.3%	coding (5478/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4202318 =	47 (0.760)					coding (5458/6624 nt)	PP_3691	DNA helicase‑related protein

CTTGCCCGGACGCAAGCGGTCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4202321‑4202298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTGATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCG  >  NC_002947/4202318‑4202463                                                                                                                                                                            CTTGCCCGGACGCAAGCGGTCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGg                                                                                                              >  5:211314/1‑61 CTTGCCCGGACGCAAGCGGTCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGC                                                                                                              <  6:211314/62‑1      CCGGACGCAAGCGGTCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAA                                                                                                                  <  3:41207/53‑1      CCGGACGCAAGCGGTCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAA                                                                                                                  >  4:41207/1‑53                     CGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTGATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCC   >  5:116293/1‑149                      GGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTGATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCG  >  2:134591/1‑149                      GGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTGATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCACCTTTCCCG  >  6:15670/1‑149                                                                                                                                                                            CTTGCCCGGACGCAAGCGGTCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4202321‑4202298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTGATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCG  >  NC_002947/4202318‑4202463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.